3D38

crystal structure of new trigonal form of photosynthetic reaction center from blastochloris viridis. crystals grown in microfluidics by detergent capture.

• Total interactions analyzed: 6
• Total true interactions: 6
• Strongest Interaction:
  • Chains: L-M
  • Int. Res.: 336
  • Norm. En. per Res.: -4.7681
• Hub Node: C(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
C-H	-9.6874	14.5434	-96.898	-92.042	24	2	4	4061	0	1	2
C-L	-68.9962	-36.8077	-453.901	-559.7048	148	17	5	17148	1	17	12
C-M	-129.1642	-55.6519	-752.574	-937.3901	203	38	18	29387	7	35	34
H-L	-112.9481	12.82	-414.559	-514.6871	160	20	14	18105	4	52	42
H-M	-130.4755	-128.3767	-723.712	-982.5642	242	27	20	28187	14	89	78
L-M	-171.6391	-119.1888	-1311.26	-1602.0879	336	63	48	50122	7	68	64

Interface residues

• C-H: ALA13H, ALA208C, ALA5H, ARG216C, ARG220C, ASP11H, GLN14H, GLN206C, GLU219C, GLY213C, GLY4H, HIS3H, HIS9H, ILE12H, LEU10H, LEU209C, LEU211C, LEU6H, PRO210C, SER215C, THR207C, TYR2H, VAL212C, VAL214C
• C-L: ALA145L, ALA177C, ALA181C, ALA184C, ALA250C, ALA250L, ALA30C, ALA63L, ALA78L, ALA7C, ARG135L, ARG15C, ARG165C, ARG175C, ARG257L, ASN158L, ASN159L, ASN166L, ASN170L, ASN243C, ASN249C, ASN67L, ASP155L, ASP238C, ASP268L, ASP70L, CYS1C, CYS244C, GLN11C, GLN163L, GLN251C, GLN87L, GLU164C, GLU21C, GLU261L, GLU3C, GLU82L, GLY13C, GLY140L, GLY143L, GLY161L, GLY16C, GLY172L, GLY20C, GLY241C, GLY247L, GLY252L, GLY258L, GLY264L, GLY56L, GLY83L, GLY84L, HIS144L, HIS153L, HIS162C, HIS168L, HIS248C, HIS24C, ILE236C, ILE66L, LEU138L, LEU139L, LEU151L, LEU152C, LEU154L, LEU165L, LEU17C, LEU185C, LEU23C, LEU267L, LEU71L, LEU80L, LEU81L, LYS178C, LYS259C, LYS31C, LYS72L, MET19C, MET233C, MET234C, PHE146L, PHE14C, PHE160L, PHE230C, PHE246C, PHE246L, PHE253C, PHE254L, PHE271L, PHE2C, PHE85L, PRO147L, PRO171L, PRO253L, PRO25C, PRO260L, PRO270L, PRO4C, PRO57L, PRO5C, PRO68L, PRO69L, PRO6C, PRO79L, SER141L, SER152L, SER183C, SER18C, SER235C, SER237C, SER239C, SER251L, SER273L, SER65L, THR10C, THR12C, THR161C, THR180C, THR242C, THR245C, THR252C, THR256L, THR27C, THR8C, THR9C, TRP142L, TRP156L, TRP167L, TRP255L, TRP259L, TRP262L, TRP263L, TRP265L, TRP266L, TRP272L, TRP86L, TYR148L, TYR162L, TYR164L, TYR169L, TYR182C, TYR73L, VAL157L, VAL163C, VAL173C, VAL174C, VAL22C, VAL28C
• C-M: ALA177C, ALA181C, ALA184C, ALA186M, ALA208C, ALA226C, ALA228C, ALA231C, ALA250C, ALA265C, ALA267C, ALA301M, ALA302M, ALA307M, ALA311M, ALA316M, ALA321M, ALA74M, ALA75M, ALA98M, ARG15C, ARG169C, ARG175C, ARG190M, ARG202C, ARG216C, ARG220C, ARG221C, ARG264C, ARG272C, ARG275C, ARG86M, ASN186C, ASN193M, ASN249C, ASN291M, ASP182M, ASP188C, ASP197C, ASP225C, ASP276C, ASP290M, ASP304M, ASP314M, ASP80M, CYS247C, CYS296M, GLN11C, GLN123C, GLN200C, GLN206C, GLN251C, GLN263C, GLN83M, GLN87M, GLN99M, GLU164C, GLU171M, GLU219C, GLU21C, GLU254C, GLU76M, GLY101M, GLY103M, GLY13C, GLY167M, GLY16C, GLY171C, GLY172M, GLY176M, GLY192M, GLY20C, GLY217C, GLY257C, GLY286M, GLY320M, GLY92M, HIS162C, HIS162M, HIS180M, HIS299M, HIS78M, ILE177M, ILE181M, ILE189M, ILE266C, ILE271C, LEU152C, LEU165M, LEU176C, LEU17C, LEU184M, LEU185C, LEU209C, LEU211C, LEU223C, LEU283M, LEU284M, LEU294M, LEU309M, LEU318M, LEU82M, LEU91M, LYS178C, LYS218C, LYS258C, LYS259C, LYS298M, LYS323M, LYS97M, MET102M, MET192C, MET19C, MET233C, MET234C, MET273C, MET279C, MET73M, PHE14C, PHE187M, PHE230C, PHE246C, PHE253C, PHE288M, PHE79M, PHE84M, PHE88M, PHE89M, PRO163M, PRO174M, PRO179M, PRO205C, PRO210C, PRO222C, PRO262C, PRO303M, PRO306M, PRO310M, PRO313M, PRO315M, PRO319M, PRO322M, PRO81M, PRO95M, PRO96M, SER168M, SER170C, SER170M, SER183C, SER188M, SER215C, SER224C, SER255C, SER260C, SER317M, THR10C, THR12C, THR161C, THR164M, THR168C, THR180C, THR185M, THR207C, THR229C, THR245C, THR252C, THR261C, THR285M, THR287M, THR312M, TRP121C, TRP169M, TRP178M, TRP183M, TRP256C, TRP268C, TRP269C, TRP292M, TRP295M, TRP90M, TYR100M, TYR172C, TYR182C, TYR187C, TYR191M, TYR195M, TYR196M, TYR227C, TYR293M, TYR305M, TYR308M, TYR94M, VAL163C, VAL166M, VAL173C, VAL173M, VAL174C, VAL203C, VAL204C, VAL214C, VAL289M, VAL297M, VAL77M
• H-L: ALA111H, ALA115H, ALA118H, ALA126H, ALA198L, ALA1L, ALA209L, ALA226L, ALA240H, ALA243H, ALA254H, ALA91H, ALA99H, ARG109L, ARG10L, ARG12L, ARG175H, ARG181H, ARG217L, ARG231L, ARG253H, ARG37H, ARG38H, ARG7L, ARG80H, ARG81H, ARG82H, ARG86H, ASN199L, ASN213L, ASP125H, ASP129H, ASP174H, ASP202L, ASP204L, ASP20L, ASP236H, ASP23L, ASP36H, ASP94H, GLN102H, GLN214L, GLN92H, GLU106L, GLU119H, GLU177H, GLU210L, GLU212L, GLU252H, GLU255H, GLU39H, GLU45H, GLU6L, GLU84H, GLU87H, GLU97H, GLY112L, GLY113H, GLY114L, GLY130H, GLY13L, GLY14L, GLY18L, GLY19L, GLY201L, GLY203L, GLY225L, GLY244H, GLY245H, GLY27L, GLY40H, GLY73H, GLY74H, GLY98H, HIS178H, HIS211L, HIS72H, ILE113L, ILE150L, ILE17L, ILE224L, LEU101H, LEU102L, LEU111L, LEU16L, LEU195L, LEU21L, LEU227L, LEU246H, LEU247H, LEU257H, LEU258H, LEU2L, LEU32H, LEU3L, LEU43H, LEU70H, LEU88H, LEU90H, LYS110L, LYS133H, LYS205L, LYS207L, LYS66H, LYS89H, LYS8L, PHE200H, PHE22L, PHE24L, PHE30L, PHE34L, PHE5L, PHE62L, PHE68H, PHE96H, PRO100H, PRO103H, PRO107H, PRO114H, PRO200L, PRO251H, PRO28L, PRO42H, PRO71H, PRO83H, SER108L, SER116H, SER176H, SER228L, SER256H, SER4L, THR127H, THR15L, THR208L, THR67H, THR75H, THR93H, TRP115L, TRP17H, TRP21H, TRP25L, TYR117H, TYR179H, TYR242H, TYR248H, TYR29L, TYR31H, TYR41H, TYR9L, VAL105L, VAL112H, VAL11L, VAL128H, VAL197L, VAL206L, VAL26L, VAL31L, VAL44H, VAL69H, VAL76H
• H-M: ALA111H, ALA115H, ALA118H, ALA121H, ALA126H, ALA12M, ALA13H, ALA140H, ALA146H, ALA19H, ALA1M, ALA225M, ALA240H, ALA242M, ALA243H, ALA247M, ALA258M, ALA278M, ALA301M, ALA44M, ALA5H, ARG120H, ARG13M, ARG153H, ARG175H, ARG181H, ARG226M, ARG231M, ARG233H, ARG239M, ARG245M, ARG251M, ARG265M, ARG33H, ARG34H, ARG37H, ARG38H, ARG80H, ARG81H, ARG82H, ASN257M, ASP11H, ASP125H, ASP129H, ASP142H, ASP149H, ASP151H, ASP174H, ASP202H, ASP230M, ASP236H, ASP238M, ASP290M, ASP2M, ASP36H, ASP43M, CYS197M, CYS201H, GLN11M, GLN14H, GLN20H, GLN235M, GLN45M, GLN4M, GLN9M, GLU119H, GLU122H, GLU147H, GLU177H, GLU232M, GLU234M, GLU235H, GLU244M, GLU261M, GLU35H, GLU39H, GLU61H, GLU84H, GLY113H, GLY148H, GLY14M, GLY199H, GLY201M, GLY205M, GLY228M, GLY229M, GLY240M, GLY244H, GLY255M, GLY267M, GLY281M, GLY286M, GLY300M, GLY39M, GLY40H, GLY42M, GLY4H, HIS143M, HIS16M, HIS178H, HIS264M, HIS299M, HIS3H, HIS72H, HIS9H, ILE10M, ILE12H, ILE134H, ILE145H, ILE17M, ILE208H, ILE230H, ILE233M, ILE236M, ILE24H, ILE254M, ILE260M, ILE41M, LEU10H, LEU137H, LEU155H, LEU15H, LEU171H, LEU183H, LEU198H, LEU213M, LEU222M, LEU22H, LEU232H, LEU246H, LEU247H, LEU248M, LEU272M, LEU283M, LEU284M, LEU29H, LEU32H, LEU43H, LEU6H, LEU70H, LYS133H, LYS204H, LYS237H, LYS298M, LYS40M, LYS66H, MET273M, PHE143H, PHE180H, PHE200H, PHE202M, PHE206M, PHE227M, PHE256M, PHE269M, PHE270M, PHE288M, PHE68H, PRO114H, PRO152H, PRO15M, PRO197H, PRO198M, PRO71H, PRO79H, PRO83H, SER116H, SER144H, SER176H, SER203M, SER20M, SER212H, SER239H, SER262M, SER277M, SER35M, THR127H, THR141H, THR18M, THR211H, THR231H, THR237M, THR241M, THR259M, THR26H, THR285M, THR287M, THR5M, THR67H, THR75H, THR77H, THR8M, TRP172H, TRP17H, TRP199M, TRP21H, TRP252M, TRP25H, TRP266M, TRP268M, TRP292M, TRP295M, TYR117H, TYR179H, TYR182H, TYR18H, TYR241H, TYR242H, TYR2H, TYR31H, TYR34M, TYR36M, TYR3M, TYR41H, TYR7M, VAL112H, VAL123H, VAL124H, VAL128H, VAL150H, VAL168H, VAL16H, VAL173H, VAL19M, VAL203H, VAL209H, VAL210H, VAL224M, VAL238H, VAL23H, VAL243M, VAL263M, VAL274M, VAL276M, VAL27H, VAL280M, VAL289M, VAL28H, VAL44H, VAL69H, VAL76H, VAL78H
• L-M: ALA120L, ALA135M, ALA137M, ALA145M, ALA151M, ALA184L, ALA186L, ALA186M, ALA198L, ALA1L, ALA1M, ALA207M, ALA209L, ALA215M, ALA216M, ALA219M, ALA223M, ALA225M, ALA226L, ALA237L, ALA242M, ALA246M, ALA247M, ALA258M, ALA301M, ALA302M, ALA44M, ALA63L, ARG103L, ARG109L, ARG10L, ARG130M, ARG134M, ARG136M, ARG217L, ARG226M, ARG231L, ARG231M, ARG239M, ARG245M, ARG251M, ARG265M, ARG28M, ARG7L, ARG86M, ASN147M, ASN158L, ASN159L, ASN166L, ASN170L, ASN183L, ASN193M, ASN199L, ASN213L, ASN239L, ASN257M, ASN67L, ASP155L, ASP182M, ASP202L, ASP204L, ASP218L, ASP230M, ASP25M, ASP268L, ASP2M, ASP304M, ASP43M, ASP60L, ASP70L, CYS197M, CYS210M, CYS296M, GLN214L, GLN45M, GLN4M, GLN83M, GLN87M, GLN9M, GLU104L, GLU106L, GLU210L, GLU212L, GLU22M, GLU232M, GLU234M, GLU244M, GLU261L, GLU261M, GLU6L, GLY112L, GLY114L, GLY139M, GLY13L, GLY141M, GLY149L, GLY161L, GLY188L, GLY191L, GLY192L, GLY192M, GLY201L, GLY201M, GLY209M, GLY211M, GLY218M, GLY21M, GLY221L, GLY225L, GLY228M, GLY229M, GLY233L, GLY240M, GLY24M, GLY255M, GLY264L, GLY267M, GLY27L, GLY300M, GLY39M, GLY42M, GLY47M, GLY55M, HIS116L, HIS143M, HIS153L, HIS168L, HIS16M, HIS173L, HIS180M, HIS190L, HIS200M, HIS211L, HIS217M, HIS230L, HIS264M, HIS299M, ILE107L, ILE113L, ILE129M, ILE144M, ILE150L, ILE177M, ILE17M, ILE181M, ILE189M, ILE194L, ILE204M, ILE221M, ILE224L, ILE229L, ILE233M, ILE236M, ILE240L, ILE254M, ILE260M, ILE269L, ILE41M, ILE46M, ILE49M, ILE64L, ILE66L, ILE6M, LEU111L, LEU119L, LEU138M, LEU140M, LEU151L, LEU154L, LEU165L, LEU180L, LEU184M, LEU187L, LEU189L, LEU193L, LEU195L, LEU212M, LEU213M, LEU222M, LEU227L, LEU232L, LEU234L, LEU236L, LEU248M, LEU267L, LEU272M, LEU2L, LEU38M, LEU3L, LEU51M, LEU71L, LEU82M, LYS110L, LYS205L, LYS207L, LYS40M, LYS72L, LYS8L, MET101L, MET174L, MET185L, MET275M, PHE121L, PHE148M, PHE154M, PHE160L, PHE179L, PHE181L, PHE194M, PHE202M, PHE206M, PHE214M, PHE216L, PHE227M, PHE235L, PHE241L, PHE249M, PHE256M, PHE269M, PHE270M, PHE271L, PHE30L, PHE33M, PHE59M, PHE5L, PHE62L, PHE84M, PHE85M, PHE88M, PHE89M, PRO118L, PRO124L, PRO147L, PRO171L, PRO179M, PRO198M, PRO200L, PRO260L, PRO270L, PRO28L, PRO303M, PRO306M, PRO32M, PRO48M, PRO57L, PRO61L, PRO81M, SER108L, SER133M, SER152L, SER188M, SER196L, SER203M, SER20M, SER223L, SER228L, SER238L, SER262M, SER271M, SER273L, SER35M, SER4L, SER54M, SER65L, THR142M, THR185M, THR18M, THR208L, THR220M, THR237M, THR241M, THR253M, THR259M, THR58L, THR5M, THR8M, TRP100L, TRP115L, TRP127M, TRP128M, TRP146M, TRP156L, TRP167L, TRP178M, TRP183M, TRP23M, TRP250M, TRP252M, TRP259L, TRP25L, TRP262L, TRP263L, TRP265L, TRP266L, TRP266M, TRP268M, TRP272L, TRP295M, TRP90M, TYR132M, TYR162L, TYR169L, TYR195M, TYR196M, TYR208M, TYR215L, TYR222L, TYR293M, TYR29L, TYR305M, TYR308M, TYR34M, TYR3M, TYR50M, TYR7M, TYR9L, VAL105L, VAL117L, VAL11L, VAL123L, VAL131M, VAL157L, VAL177L, VAL182L, VAL197L, VAL19M, VAL206L, VAL219L, VAL220L, VAL224M, VAL243M, VAL263M, VAL26L, VAL274M, VAL29M, VAL31L