3D32

complex of gaba(a) receptor-associated protein (gabarap) with a synthetic peptide

• Total interactions analyzed: 6
• Total true interactions: 4
• Strongest Interaction:
  • Chains: B-D
  • Int. Res.: 64
  • Norm. En. per Res.: -4.1753
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-12.8504	-0.0546	-37.1093	-50.0143	34	2	1	1907	0	22	10
A-C	-32.3516	11.3429	-231.375	-252.3837	64	6	6	7732	0	8	8
A-D	0.0	0.0	-69.0898	-69.0898	38	0	0	2737	0	3	2
B-D	-39.2139	11.0943	-239.102	-267.2216	64	7	6	8124	0	7	8

Interface residues

• A-B: ALA77A, ARG30B, ARG42A, ARG67A, ARG69B, ARG73A, ASP113A, ASP29B, ASP56B, ASP76A, GLU114A, GLU19B, GLU75A, ILE23B, ILE43A, ILE86A, LEU52B, LEU72A, LEU78A, LYS22B, LYS26B, LYS48B, PHE79A, PRO54B, PRO88A, SER112A, SER115A, SER55B, SER90A, THR89A, TYR27B, VAL116A, VAL31B, VAL53B
• A-C: ALA10C, ALA2C, ALA91A, ARG16A, ARG24A, ARG30A, ARG67A, ARG69A, ASP1C, ASP29A, ASP47A, ASP56A, GLN61A, GLU19A, GLU21A, GLU7C, GLY20A, GLY60A, HIS8C, ILE23A, ILE34A, ILE66A, ILE70A, LEU107A, LEU46A, LEU52A, LEU57A, LEU65A, LEU9C, LYS22A, LYS26A, LYS48A, LYS49A, LYS50A, LYS68A, MET93A, PHE105A, PHE106A, PHE62A, PHE64A, PHE80A, PRO12C, PRO32A, PRO54A, SER55A, SER90A, THR3C, THR58A, THR5C, THR89A, THR92A, TRP11C, TRP6C, TYR111A, TYR27A, TYR4C, TYR51A, TYR63A, TYR7A, VAL31A, VAL33A, VAL35A, VAL53A, VAL59A
• A-D: ALA10D, ALA2D, ALA74A, ALA77A, ALA91A, ARG67A, ARG73A, ASN84A, ASP113A, ASP76A, GLU114A, GLU75A, GLU7D, GLY118A, HIS8D, ILE86A, LEU72A, LEU78A, LEU9D, PHE79A, PHE80A, PHE81A, PRO12D, PRO87A, PRO88A, SER115A, SER90A, THR3D, THR5D, THR89A, TRP11D, TRP6D, TYR117A, TYR4D, TYR63A, VAL116A, VAL59A, VAL85A
• B-D: ALA10D, ALA2D, ALA91B, ARG16B, ARG24B, ARG30B, ARG67B, ARG69B, ASP1D, ASP29B, ASP47B, ASP56B, GLN61B, GLU19B, GLU21B, GLU7D, GLY20B, GLY60B, HIS8D, ILE23B, ILE34B, ILE66B, ILE70B, LEU107B, LEU46B, LEU52B, LEU57B, LEU65B, LEU78B, LEU9D, LYS22B, LYS26B, LYS48B, LYS49B, LYS50B, LYS68B, MET93B, PHE105B, PHE106B, PHE62B, PHE64B, PHE80B, PRO12D, PRO32B, PRO54B, SER55B, SER90B, THR3D, THR58B, THR5D, THR89B, THR92B, TRP11D, TRP6D, TYR27B, TYR4D, TYR51B, TYR63B, TYR7B, VAL31B, VAL33B, VAL35B, VAL53B, VAL59B