3D2S

crystal structure of mbnl1 tandem zinc finger 3 and 4 domain in complex with cgcugu rna

• Total interactions analyzed: 28
• Total true interactions: 5
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 60
  • Norm. En. per Res.: -4.8053
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-45.0182	-25.9035	-200.225	-271.1467	59	9	1	6840	3	29	32
A-C	0.0	0.0	-2.6272	-2.6272	19	0	1	402	0	3	5
B-C	-48.5938	-37.0222	-93.3082	-178.9242	48	5	0	3884	2	23	21
B-D	-6.3256	-18.3759	-3.1536	-27.8551	15	0	0	200	2	6	5
C-D	-58.3103	-37.003	-193.002	-288.3153	60	7	1	6882	3	29	33

Interface residues

• A-B: ALA241A, ALA245A, ARG178B, ARG181B, ARG228A, ARG228B, ARG231A, ARG231B, ASN198A, ASN214B, ASN216B, ASP180B, ASP199A, ASP212B, ASP215B, ASP223A, ASP223B, CYS200A, CYS221A, CYS221B, CYS229A, CYS229B, CYS234A, CYS234B, GLN244A, GLU197A, GLU232A, GLY227A, GLY227B, HIS238A, HIS238B, HIS242A, ILE211B, ILE225A, ILE225B, LEU243A, LYS226A, LYS226B, LYS233A, LYS235A, LYS235B, MET210B, MET222A, MET222B, PRO239A, PRO240A, SER230A, SER230B, THR179B, THR209B, THR213B, THR217B, THR219B, TYR224A, TYR224B, TYR236A, TYR236B, VAL218B, VAL220B
• A-C: ALA206C, ALA241A, ALA245A, ARG228A, ASP207C, GLN189C, GLN244A, HIS242A, ILE211C, ILE225A, LYS226A, LYS233C, LYS235C, MET210C, SER208C, THR179A, THR209C, THR213C, VAL184C
• B-C: ALA203C, ALA206B, ALA206C, ARG190B, ARG190C, ARG231B, ARG231C, ASN192C, ASN216B, ASP207B, ASP207C, ASP212B, CYS193C, CYS229B, CYS234B, CYS234C, GLN189B, GLN189C, GLU197C, GLU232B, GLU232C, GLY191C, GLY196C, HIS204B, HIS204C, HIS238B, HIS238C, ILE211B, LYS233B, LYS233C, LYS235B, MET210B, PHE237C, PRO205B, PRO205C, PRO239C, PRO240C, SER208B, SER208C, SER230B, THR209B, THR209C, THR213B, TYR188B, TYR188C, TYR236B, VAL184B, VAL218B
• B-D: ALA245D, ARG178D, ARG190B, ARG201D, ASN192B, ASP180D, ASP207B, GLN189B, GLY191B, LYS226D, LYS233B, MET222D, SER208B, THR179D, TYR188B
• C-D: ALA241C, ALA245C, ARG178D, ARG181D, ARG228C, ARG228D, ARG231C, ARG231D, ASN198C, ASN214D, ASN216D, ASP180D, ASP199C, ASP212D, ASP215D, ASP223C, ASP223D, CYS200C, CYS221C, CYS221D, CYS229C, CYS229D, CYS234C, CYS234D, GLN244C, GLU197C, GLU232C, GLY227C, GLY227D, HIS238C, HIS238D, HIS242C, ILE211D, ILE225C, ILE225D, LEU243C, LYS226C, LYS226D, LYS233C, LYS235D, MET210D, MET222C, MET222D, PHE237C, PRO239C, PRO240C, SER230C, SER230D, THR179D, THR209D, THR213D, THR217D, THR219D, TYR224C, TYR224D, TYR236C, TYR236D, VAL218D, VAL220C, VAL220D