3CX5
structure of complex iii with bound cytochrome c in reduced state and definition of a minimal core interface for electron transfer.
Total interactions analyzed 253
Total true interactions 82
Strongest Interaction Chains D-I
Int. Res. 79
Norm. En. per Res. -5.6311
Hub Node A(9)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -61.2167 -35.0248 -362.281 -458.5225 180 16 19 15919 4 40 43
A-C -23.3132 -38.7756 -97.0133 -159.1022 53 6 0 4164 7 19 21
A-D 0.0 -16.8056 -22.3645 -39.1701 43 0 0 1375 2 22 11
A-E -22.1837 -50.0749 -134.032 -206.2905 78 8 0 5208 2 16 10
A-G 0.0 0.0 -2.8154 -2.8154 8 0 0 182 0 4 7
A-H -86.4172 -16.4442 -235.556 -338.4174 73 15 4 8952 0 11 10
A-I -9.5334 -4.7225 -50.7028 -64.9587 26 1 0 1869 0 5 8
A-R -14.8996 -21.6338 -37.7771 -74.3105 33 4 0 1766 4 13 15
A-S 0.0 0.0 -13.7965 -13.7965 15 2 0 647 0 2 0
B-D 0.0 0.0 -1.3853 -1.3853 3 0 0 70 0 1 0
B-M -90.1342 -123.3275 -219.813 -433.2747 101 21 4 8781 15 53 44
B-O -5.1471 0.0 -7.1904 -12.3375 4 1 0 264 0 0 2
B-R -9.3618 -83.2779 -75.0389 -167.6787 43 5 1 3413 6 26 17
C-D -17.8973 -55.8956 -443.231 -517.0239 157 9 18 17679 5 30 38
C-E -24.3267 10.4063 -138.274 -152.1944 54 7 1 5176 2 5 2
C-G -37.0028 -112.369 -493.022 -642.3938 149 18 31 21593 4 22 16
C-H -28.6641 0.0 -419.655 -448.3191 143 7 8 14459 0 6 11
C-I 0.0 0.0 -0.0584 -0.0584 3 0 0 23 0 0 0
C-N -19.9046 17.3412 -275.562 -278.1254 135 8 12 11174 0 6 7
C-P -20.5575 6.7889 -295.031 -308.7996 119 10 6 12740 0 10 18
C-S 0.0 0.0 -35.2628 -35.2628 24 0 0 1533 0 0 1
D-E -25.0539 -15.1929 -152.847 -193.0937 92 6 5 6941 0 19 19
D-F -63.0469 21.2565 -328.689 -370.4794 116 19 12 12790 0 26 30
D-G -20.5972 -0.0244 -103.213 -123.8346 42 3 2 4089 0 11 14
D-H -60.0043 3.6469 -196.223 -252.5805 64 7 3 7125 0 4 10
D-I -83.1484 -96.1414 -265.571 -444.8608 79 10 3 9691 6 39 38
D-M 0.0 0.0 -2.755 -2.755 4 0 0 205 0 0 2
D-O -6.0233 -0.4171 -86.7453 -93.1857 39 0 0 3118 0 8 8
D-P 0.0 0.0 -0.1368 -0.1368 9 0 0 52 0 1 4
D-W 0.0 0.0 -0.1669 -0.1669 4 0 0 33 0 2 0
E-G 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 2 1
E-H -30.7912 -3.8429 -131.513 -166.147 43 7 3 5123 0 6 3
E-I -8.2974 -31.763 -188.056 -228.1164 58 7 11 7425 4 7 7
E-J -9.4549 4.5471 -171.38 -176.2877 56 2 3 6022 0 10 11
E-K -9.8139 -41.4019 -50.3308 -101.5466 30 1 1 2042 4 6 7
E-N -21.1387 4.6638 -287.551 -304.0259 120 9 6 12555 0 9 18
E-O 0.0 0.0 -0.1329 -0.1329 18 0 0 61 0 1 4
E-Q 0.0 -4.6479 -0.1926 -4.8404 4 0 0 31 0 3 7
E-S 0.0 0.0 -7.9624 -7.9624 12 0 0 490 0 4 2
F-H -29.6011 -44.0783 -38.6361 -112.3156 29 4 0 1394 4 16 14
F-I 0.0 0.0 -0.3949 -0.3949 3 0 0 52 0 1 2
F-P 0.0 -4.1842 -0.052 -4.2361 3 0 0 14 0 3 6
F-V 0.0 0.0 -0.0065 -0.0065 2 0 0 3 0 0 0
G-H 0.0 13.4081 -103.515 -90.1069 62 1 3 4133 0 11 16
G-L -12.5712 -17.4371 -35.0823 -65.0906 31 3 0 1721 3 13 15
G-M -8.8978 -79.1792 -78.2124 -166.2894 45 5 1 3427 6 26 17
H-I 0.0 0.0 -0.0388 -0.0388 6 0 0 17 0 0 0
H-L -11.1708 -5.7938 -22.9872 -39.9518 17 3 0 929 0 2 0
H-N 0.0 0.0 -29.9337 -29.9337 24 0 0 1337 0 0 1
H-P -8.3545 2.1307 -6.3586 -12.5824 12 1 0 443 0 4 2
H-S 0.0 0.0 -59.0688 -59.0688 23 2 0 1605 0 0 0
J-K -25.8178 -7.062 -292.762 -325.6418 94 12 5 10778 0 14 7
K-Q 0.0 0.0 -0.0257 -0.0257 2 0 0 5 0 1 0
L-M -32.5722 -37.2949 -373.0 -442.8671 181 16 17 16273 4 40 41
L-N -28.6289 -41.5463 -96.4281 -166.6033 52 10 0 4229 7 19 22
L-O -4.6786 -16.9578 -16.0972 -37.7337 42 0 0 1229 2 22 10
L-P -27.0085 -46.4796 -127.377 -200.8651 76 5 0 5074 1 16 10
L-R 0.0 0.0 -2.2963 -2.2963 8 0 0 164 0 4 7
L-S -83.8444 -18.0082 -234.043 -335.8956 74 16 4 8903 1 11 10
L-T -8.2521 1.3893 -48.9333 -55.7961 27 3 0 2032 0 5 8
M-O 0.0 0.0 -0.0454 -0.0454 3 0 0 18 0 1 0
N-O -21.7008 -56.0121 -447.949 -525.6619 156 10 17 17740 4 30 38
N-P -23.4555 7.7628 -139.345 -155.0377 55 4 1 5127 1 5 2
N-R -31.6003 -105.4227 -496.061 -633.084 148 16 31 21283 4 22 15
N-S -6.753 0.0 -414.887 -421.64 139 11 8 14302 0 6 9
N-T 0.0 0.0 -0.0535 -0.0535 3 0 0 14 0 0 0
O-P -13.9055 -11.9784 -152.188 -178.0719 94 8 5 7065 0 22 21
O-Q -69.4311 26.767 -320.999 -363.6631 114 12 12 12758 0 25 30
O-R -21.6973 -5.824 -101.869 -129.3903 42 3 2 4047 1 11 15
O-S -60.2185 1.0105 -197.412 -256.62 63 8 3 6991 0 4 9
O-T -76.5358 -83.1813 -263.429 -423.1461 77 14 3 9245 5 40 38
O-W 0.0 -20.3757 -66.7494 -87.1251 63 0 2 3406 2 20 8
P-R 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 2 1
P-S -12.0908 -7.4287 -138.491 -158.0104 46 5 3 5281 0 6 3
P-T -2.7518 -31.5903 -179.723 -214.0651 56 12 11 7249 5 7 7
P-U -10.4611 6.916 -165.6 -169.1451 57 4 4 5896 0 10 11
P-V -6.2951 -30.5859 -47.1652 -84.0462 30 2 1 2029 2 6 7
Q-S -40.7854 -46.216 -41.0487 -128.0501 27 2 0 1327 5 16 14
Q-T 0.0 0.0 -0.0111 -0.0111 2 0 0 9 0 1 2
R-S 0.0 22.4244 -106.846 -84.4216 64 3 3 4225 0 11 18
S-T 0.0 0.0 -0.0407 -0.0407 5 0 0 21 0 0 0
U-V 0.0 -9.5966 -291.74 -301.3366 91 6 5 10578 0 14 8