3CMO

hiv neutralizing monoclonal antibody yz18

• Total interactions analyzed: 6
• Total true interactions: 5
• Strongest Interaction:
  • Chains: X-Y
  • Int. Res.: 184
  • Norm. En. per Res.: -3.1255
• Hub Node: L(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
L-H	-39.8406	9.7812	-531.629	-561.6884	187	21	14	20776	0	11	9
L-X	-20.9694	-1.413	-55.9657	-78.3481	47	2	6	2818	0	13	11
L-Y	-12.2462	0.0	-58.1403	-70.3865	37	4	0	2847	0	2	1
H-X	-9.0918	0.0	-55.823	-64.9148	37	3	0	2652	0	2	1
X-Y	-44.7891	-10.2607	-520.044	-575.0939	184	13	15	20143	1	9	7

Interface residues

• L-H: ALA125H, ALA130L, ALA174H, ALA50H, ARG100H, ARG53L, ARG94H, ASN137L, ASN138L, ASN161L, ASN210L, ASN34L, ASN60H, ASP101H, ASP130H, ASP165L, ASP167L, ASP170L, ASP1L, ASP41L, CYS128H, CYS134L, CYS140H, CYS88L, CYS92H, GLN105H, GLN124L, GLN177H, GLN37L, GLN38L, GLN39H, GLN43H, GLN55L, GLN61H, GLN6L, GLN89L, GLN90L, GLU123L, GLU222H, GLU45L, GLU46H, GLY100H, GLY101L, GLY104H, GLY106H, GLY129H, GLY129L, GLY133H, GLY139H, GLY158L, GLY167H, GLY42H, GLY42L, GLY44H, GLY49H, GLY99L, HIS170H, HIS35H, ILE117L, ILE221H, ILE48H, ILE48L, LEU124H, LEU125L, LEU136L, LEU138H, LEU141H, LEU160L, LEU176H, LEU179L, LEU181L, LEU182H, LEU185H, LEU33L, LEU45H, LEU46L, LEU47L, LEU54L, LEU94L, LYS103L, LYS143H, LYS169L, LYS207L, LYS219H, LYS220H, LYS38H, LYS39L, LYS62H, LYS64H, LYS93L, MET175L, PHE100H, PHE118L, PHE135L, PHE139L, PHE172H, PHE209L, PHE63H, PHE96L, PHE98L, PRO113L, PRO119L, PRO120L, PRO123H, PRO126H, PRO173H, PRO96H, SER100H, SER100L, SER116L, SER120H, SER121L, SER122L, SER127L, SER131L, SER135H, SER162L, SER165H, SER166H, SER174L, SER176L, SER177L, SER178H, SER186H, SER187H, SER188H, SER208L, SER56L, SER58H, SER92L, THR114L, THR126L, THR131H, THR132H, THR137H, THR164L, THR171H, THR172L, THR178L, THR180L, THR184H, THR190H, THR43L, THR51L, THR85L, THR93H, THR97L, TRP103H, TRP155H, TRP163L, TRP197H, TRP33H, TRP35L, TRP36H, TRP47H, TRP95H, TYR100H, TYR102H, TYR122H, TYR173L, TYR183H, TYR192L, TYR32L, TYR36L, TYR49L, TYR50L, TYR59H, TYR86L, TYR87L, TYR91H, TYR91L, TYR98H, VAL115L, VAL121H, VAL127H, VAL132L, VAL133L, VAL136H, VAL142H, VAL159L, VAL169H, VAL175H, VAL189H, VAL206L, VAL37H, VAL44L, VAL89H
• L-X: ALA109L, ALA109X, ALA111L, ALA111X, ALA112L, ALA112X, ARG108L, ARG108X, ASN137L, ASN137X, ASN138L, ASN138X, ASP110L, ASP110X, HIS198L, HIS198X, ILE205L, ILE205X, LYS107L, LYS107X, LYS199L, LYS199X, LYS207L, LYS207X, PHE139L, PHE139X, PRO113L, PRO113X, PRO141L, PRO141X, SER14L, SER14X, SER201L, SER201X, SER203L, SER203X, THR114L, THR114X, THR172L, THR200L, THR200X, THR202L, THR202X, TYR140L, TYR140X, VAL115L, VAL115X
• L-Y: ALA109L, ALA13L, ARG108L, ASP110L, ASP130Y, ASP167L, ASP170L, ASP17L, CYS128Y, GLN166L, GLU105L, GLU81L, GLY129Y, GLY133Y, GLY16L, ILE106L, ILE83L, LEU15L, LEU78L, LYS107L, LYS169L, PRO80L, SER134Y, SER135Y, SER14L, SER168L, SER171L, SER193Y, SER194Y, THR131Y, THR132Y, THR172L, THR192Y, THR196Y, TYR140L, VAL136Y, VAL79L
• H-X: ALA109X, ALA13X, ARG108X, ASP110X, ASP130H, ASP167X, ASP170X, ASP17X, CYS128H, GLN166X, GLU105X, GLU81X, GLY129H, GLY133H, GLY16X, ILE106X, ILE83X, LEU15X, LEU78X, LYS107X, LYS169X, PRO80X, SER134H, SER135H, SER14X, SER168X, SER171X, SER193H, SER194H, THR131H, THR132H, THR172X, THR192H, THR196H, TYR140X, VAL136H, VAL79X
• X-Y: ALA112X, ALA125Y, ALA130X, ALA174Y, ALA50Y, ARG100Y, ARG53X, ARG94Y, ASN137X, ASN138X, ASN161X, ASN210X, ASN34X, ASN60Y, ASP101Y, ASP130Y, ASP165X, ASP167X, ASP170X, ASP41X, CYS128Y, CYS134X, CYS140Y, CYS88X, GLN105Y, GLN124X, GLN177Y, GLN37X, GLN38X, GLN39Y, GLN43Y, GLN55X, GLN61Y, GLN6X, GLN89X, GLN90X, GLU123X, GLU222Y, GLU45X, GLU46Y, GLY100Y, GLY101X, GLY104Y, GLY106Y, GLY128X, GLY129X, GLY129Y, GLY133Y, GLY139Y, GLY158X, GLY167Y, GLY42X, GLY42Y, GLY44Y, GLY49Y, GLY99X, HIS170Y, HIS35Y, ILE117X, ILE205X, ILE221Y, ILE48X, ILE48Y, LEU124Y, LEU125X, LEU136X, LEU138Y, LEU141Y, LEU152Y, LEU160X, LEU176Y, LEU179X, LEU181X, LEU182Y, LEU185Y, LEU33X, LEU45Y, LEU46X, LEU47X, LEU54X, LEU94X, LYS103X, LYS143Y, LYS169X, LYS207X, LYS219Y, LYS220Y, LYS38Y, LYS39X, LYS64Y, LYS93X, MET175X, PHE100Y, PHE118X, PHE135X, PHE139X, PHE172Y, PHE209X, PHE96X, PHE98X, PRO113X, PRO119X, PRO120X, PRO123Y, PRO126Y, PRO173Y, PRO96Y, SER100X, SER100Y, SER116X, SER120Y, SER121X, SER122X, SER127X, SER131X, SER135Y, SER162X, SER166Y, SER174X, SER176X, SER177X, SER178Y, SER186Y, SER187Y, SER188Y, SER208X, SER56X, SER58Y, SER92X, THR114X, THR126X, THR131Y, THR132Y, THR137Y, THR164X, THR171Y, THR172X, THR178X, THR180X, THR184Y, THR190Y, THR43X, THR85X, THR93Y, THR97X, TRP103Y, TRP155Y, TRP163X, TRP197Y, TRP33Y, TRP35X, TRP36Y, TRP47Y, TRP95Y, TYR100Y, TYR102Y, TYR122Y, TYR173X, TYR183Y, TYR186X, TYR32X, TYR36X, TYR49X, TYR50X, TYR59Y, TYR86X, TYR87X, TYR91X, TYR91Y, VAL115X, VAL121Y, VAL127Y, VAL132X, VAL133X, VAL136Y, VAL142Y, VAL159X, VAL169Y, VAL175Y, VAL189Y, VAL206X, VAL37Y, VAL44X, VAL89Y