3CMA
the structure of cca and cca-phe-cap-bio bound to the large ribosomal subunit of haloarcula marismortui
Total interactions analyzed 528
Total true interactions 27
Strongest Interaction Chains A-Z
Int. Res. 111
Norm. En. per Res. -3.945
Hub Node C(5)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-M 0.0 0.0 -0.965 -0.965 5 0 0 129 0 0 3
A-Z -93.8322 -25.7302 -318.335 -437.8974 111 21 7 13212 2 26 23
B-J -20.2421 -23.9801 -49.2952 -93.5174 34 1 0 2015 1 3 0
B-K -6.7007 8.4246 -51.5289 -49.8049 37 3 0 2565 0 11 20
B-U -11.7052 8.7311 -42.1275 -45.1016 26 6 0 1375 0 5 5
C-L 0.0 0.0 -0.0028 -0.0028 2 0 0 3 0 0 3
C-O 0.0 3.9255 -42.3824 -38.4569 21 4 0 1698 0 7 6
C-T 0.0 0.8908 -14.9118 -14.021 14 0 0 802 0 3 10
C-Y 0.0 0.0 -0.0102 -0.0102 2 0 0 9 0 1 1
C-1 0.0 -16.1301 -44.8774 -61.0074 16 4 0 1421 1 5 6
D-N -9.8085 2.2222 -47.2937 -54.8799 27 7 1 2171 0 13 20
E-J -13.8427 9.7736 -64.2786 -68.3477 24 8 1 2433 0 7 8
F-M -41.1021 -6.1398 -183.817 -231.0588 70 17 3 7888 4 23 26
H-Q 0.0 0.0 -0.047 -0.047 3 0 0 16 0 0 0
K-U -43.5525 -19.0887 -138.427 -201.0683 55 5 3 5624 1 17 20
L-M 0.0 0.0 -0.0055 -0.0055 2 0 0 7 0 0 1
L-O 0.0 0.0 -13.1781 -13.1781 25 1 0 944 0 5 6
L-Y 0.0 0.0 -11.7129 -11.7129 14 1 0 392 0 0 12
L-3 0.0 0.0 -2.9507 -2.9507 5 0 0 170 0 0 2
M-3 0.0 -1.0709 -30.0791 -31.15 19 1 0 1413 0 4 1
N-Q -15.6742 4.1554 -87.001 -98.5198 55 7 3 4726 0 11 18
R-X 0.0 0.0 -0.0636 -0.0636 3 0 0 6 0 0 8
R-2 0.0 0.0 -0.0427 -0.0427 3 0 0 23 0 0 1
S-V 0.0 -7.4171 -58.307 -65.7241 38 4 4 2901 2 12 15
S-2 -14.5114 -5.0106 -51.2025 -70.7245 26 2 0 2328 1 19 12
T-2 0.0 0.0 -0.0204 -0.0204 3 0 0 5 0 2 2
1-2 0.0 -2.4638 -34.0706 -36.5344 22 2 0 1601 0 17 15