3CLC

crystal structure of the restriction-modification controller protein c.esp1396i tetramer in complex with its natural 35 base-pair operator

• Total interactions analyzed: 15
• Total true interactions: 3
• Strongest Interaction:
  • Chains: B-C
  • Int. Res.: 8
  • Norm. En. per Res.: -11.1653
• Hub Node: A(1)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-72.8334	-11.8597	-201.273	-285.966	78	24	19	11121	0	16	16
B-C	-22.2783	-53.885	-13.1588	-89.3221	8	2	0	488	5	6	4
C-D	-63.8457	-10.3863	-228.407	-302.639	76	25	19	11206	1	18	17

Interface residues

• A-B: ARG46A, ARG46B, ASN44A, ASN47A, ASN47B, ASP64A, ASP64B, CB9.86404-8.28162, GLU2A, GLU2A5, GLU2B, GLU54A, GLU54B, GLU69A, GLU69B, GLU74B, ILE13A, ILE13B, ILE41A, ILE41B, ILE50A, ILE50B, ILE72A, ILE72B, ILE75A, ILE75B, LEU48A, LEU48B, LEU53A, LEU53B, LEU55A, LEU55B, LEU5A, LEU5B, LEU6A, LEU6B, LEU71A, LEU71B, LEU76A, LEU76B, LYS51A, LYS51B, LYS58A, LYS73A, LYS73B, LYS8A, LYS8B, MET57A, MET57B, MET70A, MET70B, PHE4A, PHE4B, PHE67A, PHE67B, PHE68A, PHE68B, SER10A, SER10B, SER3A, SER3B, SER45A, SER45B, SER52A, SER52B, SER63A, SER63B, SER7A, SER7B, THR49A, THR49B, TYR37B, VAL65A, VAL65B, VAL66A, VAL66B, VAL9A, VAL9B
• B-C: ALA28B, ARG35B, ARG35C, GLN24C, GLU25B, GLU25C, THR23C, TYR29B
• C-D: ARG46C, ARG46D, ASN44D, ASN47C, ASN47D, ASP64C, ASP64D, GLU2C, GLU2D, GLU54C, GLU54D, GLU69C, GLU69D, GLU74C, ILE13C, ILE13D, ILE41C, ILE41D, ILE50C, ILE50D, ILE72C, ILE72D, ILE75C, ILE75D, LEU48C, LEU48D, LEU53C, LEU53D, LEU55C, LEU55D, LEU5C, LEU5D, LEU6C, LEU6D, LEU71C, LEU71D, LEU76C, LEU76D, LYS51C, LYS51D, LYS58D, LYS73C, LYS73D, LYS8C, LYS8D, MET57C, MET57D, MET70C, MET70D, PHE4C, PHE4D, PHE67C, PHE67D, PHE68C, PHE68D, SER10C, SER10D, SER3C, SER3D, SER45C, SER45D, SER52C, SER52D, SER63C, SER63D, SER7C, SER7D, THR49C, THR49D, TYR37C, VAL65C, VAL65D, VAL66C, VAL66D, VAL9C, VAL9D