3CAU

d7 symmetrized structure of unliganded groel at 4.2 angstrom resolution by cryoem

• Total interactions analyzed: 91
• Total true interactions: 28
• Strongest Interaction:
  • Chains: F-J
  • Int. Res.: 4
  • Norm. En. per Res.: -0.0418
• Hub Node: A(4)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	0.0	250.252	250.252	56	27	0	1169	0	0	0
A-G	0.0	0.0	304.412	304.412	56	25	0	1167	0	0	0
A-H	0.0	0.0	-0.165	-0.165	4	0	0	51	0	0	0
A-I	0.0	0.0	-0.017	-0.017	6	0	0	18	0	0	0
B-C	0.0	0.0	260.033	260.033	54	22	0	1146	0	0	0
B-H	0.0	0.0	-0.0163	-0.0163	6	0	0	16	0	0	0
B-N	0.0	0.0	-0.159	-0.159	4	0	0	48	0	0	0
C-D	0.0	0.0	232.574	232.574	56	25	0	1157	0	0	0
C-M	0.0	0.0	-0.1651	-0.1651	4	0	0	51	0	0	0
C-N	0.0	0.0	-0.0121	-0.0121	6	0	0	13	0	0	0
D-E	0.0	0.0	277.431	277.431	57	24	0	1156	0	0	0
D-L	0.0	0.0	-0.163	-0.163	4	0	0	50	0	0	0
D-M	0.0	0.0	-0.0125	-0.0125	6	0	0	14	0	0	0
E-F	0.0	0.0	263.748	263.748	56	27	0	1147	0	0	0
E-K	0.0	0.0	-0.1638	-0.1638	4	0	0	49	0	0	0
E-L	0.0	0.0	-0.0121	-0.0121	6	0	0	11	0	0	0
F-G	0.0	0.0	26.2773	26.2773	56	30	0	1162	0	0	0
F-J	0.0	0.0	-0.1673	-0.1673	4	0	0	51	0	0	0
F-K	0.0	0.0	-0.0128	-0.0128	6	0	0	14	0	0	0
G-I	0.0	0.0	-0.1594	-0.1594	4	0	0	48	0	0	0
G-J	0.0	0.0	-0.0123	-0.0123	6	0	0	13	0	0	0
H-I	0.0	0.0	252.386	252.386	56	27	0	1168	0	0	0
H-N	0.0	0.0	301.05	301.05	56	25	0	1167	0	0	0
I-J	0.0	0.0	259.731	259.731	54	22	0	1150	0	0	0
J-K	0.0	0.0	244.971	244.971	56	25	0	1157	0	0	0
K-L	0.0	0.0	281.941	281.941	57	24	0	1157	0	0	0
L-M	0.0	0.0	258.12	258.12	56	27	0	1147	0	0	0
M-N	0.0	0.0	25.7184	25.7184	56	30	0	1164	0	0	0

Interface residues

• A-B: ALA26A, ALA2B, ALA3B, ALA46A, ARG36A, ASN229B, ASN37A, ASP359B, ASP41A, ASP523B, ASP52A, ASP5B, ASP64A, CYS519B, GLN184A, GLU518B, GLU61A, GLU63A, GLY19A, GLY35A, GLY70B, ILE267A, ILE515B, ILE60A, LEU183A, LEU23A, LEU40A, LEU513B, LEU524B, LEU62A, LYS34A, LYS42A, LYS4B, LYS51A, LYS7B, MET114B, MET514B, MET520B, MET69B, MET73B, PHE66B, PRO47A, PRO525B, SER228B, THR266A, THR48A, THR50A, THR516B, THR517B, THR522B, TYR360B, VAL22A, VAL38A, VAL39A, VAL521B, VAL6B
• A-G: ALA26G, ALA2A, ALA3A, ALA46G, ALA57G, ARG36G, ASN229A, ASN37G, ASP359A, ASP41G, ASP523A, ASP52G, ASP5A, CYS519A, GLN184G, GLU518A, GLU61G, GLU63G, GLY35G, GLY70A, ILE267G, ILE515A, ILE60G, LEU183G, LEU23G, LEU40G, LEU513A, LEU524A, LEU62G, LYS34G, LYS42G, LYS4A, LYS51G, LYS7A, MET114A, MET514A, MET520A, MET69A, MET73A, PHE66A, PRO47G, PRO525A, SER228A, THR266G, THR48G, THR50G, THR516A, THR517A, THR522A, TYR360A, VAL22G, VAL29G, VAL38G, VAL39G, VAL521A, VAL6A
• A-H: ALA466A, ALA466H, PRO462A, PRO462H
• A-I: GLY110A, GLY110I, LEU104A, LEU104I, VAL107A, VAL107I
• B-C: ALA26B, ALA2C, ALA3C, ALA46B, ALA57B, ARG36B, ASN229C, ASN37B, ASP41B, ASP523C, ASP52B, ASP5C, CYS519C, GLN184B, GLU518C, GLU61B, GLU63B, GLY35B, GLY70C, ILE267B, ILE515C, ILE60B, LEU183B, LEU23B, LEU40B, LEU513C, LEU524C, LEU62B, LYS34B, LYS42B, LYS4C, LYS51B, LYS7C, MET114C, MET514C, MET520C, MET69C, MET73C, PRO47B, PRO525C, SER228C, THR266B, THR48B, THR50B, THR516C, THR517C, THR522C, TYR360C, VAL22B, VAL29B, VAL38B, VAL39B, VAL521C, VAL6C
• B-H: GLY110B, GLY110H, LEU104B, LEU104H, VAL107B, VAL107H
• B-N: ALA466B, ALA466N, PRO462B, PRO462N
• C-D: ALA26C, ALA2D, ALA3D, ALA46C, ARG36C, ASN229D, ASN37C, ASP359D, ASP41C, ASP523D, ASP52C, ASP5D, ASP64C, CYS519D, GLN184C, GLU518D, GLU61C, GLU63C, GLY19C, GLY35C, GLY70D, ILE267C, ILE515D, ILE60C, LEU183C, LEU23C, LEU40C, LEU513D, LEU524D, LEU62C, LYS34C, LYS42C, LYS4D, LYS51C, MET114D, MET514D, MET520D, MET69D, MET73D, PHE66D, PRO47C, PRO525D, SER228D, THR266C, THR48C, THR50C, THR516D, THR517D, THR522D, TYR360D, VAL22C, VAL29C, VAL38C, VAL39C, VAL521D, VAL6D
• C-M: ALA466C, ALA466M, PRO462C, PRO462M
• C-N: GLY110C, GLY110N, LEU104C, LEU104N, VAL107C, VAL107N
• D-E: ALA26D, ALA2E, ALA3E, ALA46D, ALA57D, ARG36D, ASN229E, ASN37D, ASP359E, ASP41D, ASP523E, ASP52D, ASP5E, ASP64D, CYS519E, GLN184D, GLU518E, GLU61D, GLU63D, GLY19D, GLY35D, GLY70E, ILE267D, ILE515E, ILE60D, LEU183D, LEU23D, LEU40D, LEU513E, LEU524E, LEU62D, LYS34D, LYS42D, LYS4E, LYS51D, LYS7E, MET114E, MET514E, MET520E, MET69E, MET73E, PRO47D, PRO525E, SER228E, THR266D, THR48D, THR50D, THR516E, THR517E, THR522E, TYR360E, VAL22D, VAL29D, VAL38D, VAL39D, VAL521E, VAL6E
• D-L: ALA466D, ALA466L, PRO462D, PRO462L
• D-M: GLY110D, GLY110M, LEU104D, LEU104M, VAL107D, VAL107M
• E-F: ALA26E, ALA2F, ALA3F, ALA46E, ALA57E, ARG36E, ASN229F, ASN37E, ASP359F, ASP41E, ASP523F, ASP52E, ASP5F, ASP64E, CYS519F, GLN184E, GLU518F, GLU61E, GLU63E, GLY35E, GLY70F, ILE267E, ILE515F, ILE60E, LEU183E, LEU23E, LEU40E, LEU513F, LEU524F, LEU62E, LYS34E, LYS42E, LYS4F, LYS51E, MET114F, MET514F, MET520F, MET69F, MET73F, PHE66F, PRO47E, PRO525F, SER228F, THR266E, THR48E, THR50E, THR516F, THR517F, THR522F, TYR360F, VAL22E, VAL29E, VAL38E, VAL39E, VAL521F, VAL6F
• E-K: ALA466E, ALA466K, PRO462E, PRO462K
• E-L: GLY110E, GLY110L, LEU104E, LEU104L, VAL107E, VAL107L
• F-G: ALA26F, ALA2G, ALA3G, ALA46F, ARG36F, ASN229G, ASN37F, ASP359G, ASP41F, ASP523G, ASP52F, ASP5G, ASP64F, CYS519G, GLN184F, GLU518G, GLU61F, GLU63F, GLY19F, GLY35F, GLY70G, ILE267F, ILE515G, ILE60F, LEU183F, LEU23F, LEU40F, LEU513G, LEU524G, LEU62F, LYS34F, LYS42F, LYS4G, LYS51F, LYS7G, MET114G, MET514G, MET520G, MET69G, MET73G, PRO47F, PRO525G, SER228G, THR266F, THR48F, THR50F, THR516G, THR517G, THR522G, TYR360G, VAL22F, VAL29F, VAL38F, VAL39F, VAL521G, VAL6G
• F-J: ALA466F, ALA466J, PRO462F, PRO462J
• F-K: GLY110F, GLY110K, LEU104F, LEU104K, VAL107F, VAL107K
• G-I: ALA466G, ALA466I, PRO462G, PRO462I
• G-J: GLY110G, GLY110J, LEU104G, LEU104J, VAL107G, VAL107J
• H-I: ALA26H, ALA2I, ALA3I, ALA46H, ARG36H, ASN229I, ASN37H, ASP359I, ASP41H, ASP523I, ASP52H, ASP5I, ASP64H, CYS519I, GLN184H, GLU518I, GLU61H, GLU63H, GLY19H, GLY35H, GLY70I, ILE267H, ILE515I, ILE60H, LEU183H, LEU23H, LEU40H, LEU513I, LEU524I, LEU62H, LYS34H, LYS42H, LYS4I, LYS51H, LYS7I, MET114I, MET514I, MET520I, MET69I, MET73I, PHE66I, PRO47H, PRO525I, SER228I, THR266H, THR48H, THR50H, THR516I, THR517I, THR522I, TYR360I, VAL22H, VAL38H, VAL39H, VAL521I, VAL6I
• H-N: ALA26N, ALA2H, ALA3H, ALA46N, ALA57N, ARG36N, ASN229H, ASN37N, ASP359H, ASP41N, ASP523H, ASP52N, ASP5H, CYS519H, GLN184N, GLU518H, GLU61N, GLU63N, GLY35N, GLY70H, ILE267N, ILE515H, ILE60N, LEU183N, LEU23N, LEU40N, LEU513H, LEU524H, LEU62N, LYS34N, LYS42N, LYS4H, LYS51N, LYS7H, MET114H, MET514H, MET520H, MET69H, MET73H, PHE66H, PRO47N, PRO525H, SER228H, THR266N, THR48N, THR50N, THR516H, THR517H, THR522H, TYR360H, VAL22N, VAL29N, VAL38N, VAL39N, VAL521H, VAL6H
• I-J: ALA26I, ALA2J, ALA3J, ALA46I, ALA57I, ARG36I, ASN229J, ASN37I, ASP41I, ASP523J, ASP52I, ASP5J, CYS519J, GLN184I, GLU518J, GLU61I, GLU63I, GLY35I, GLY70J, ILE267I, ILE515J, ILE60I, LEU183I, LEU23I, LEU40I, LEU513J, LEU524J, LEU62I, LYS34I, LYS42I, LYS4J, LYS51I, LYS7J, MET114J, MET514J, MET520J, MET69J, MET73J, PRO47I, PRO525J, SER228J, THR266I, THR48I, THR50I, THR516J, THR517J, THR522J, TYR360J, VAL22I, VAL29I, VAL38I, VAL39I, VAL521J, VAL6J
• J-K: ALA26J, ALA2K, ALA3K, ALA46J, ARG36J, ASN229K, ASN37J, ASP359K, ASP41J, ASP523K, ASP52J, ASP5K, ASP64J, CYS519K, GLN184J, GLU518K, GLU61J, GLU63J, GLY19J, GLY35J, GLY70K, ILE267J, ILE515K, ILE60J, LEU183J, LEU23J, LEU40J, LEU513K, LEU524K, LEU62J, LYS34J, LYS42J, LYS4K, LYS51J, MET114K, MET514K, MET520K, MET69K, MET73K, PHE66K, PRO47J, PRO525K, SER228K, THR266J, THR48J, THR50J, THR516K, THR517K, THR522K, TYR360K, VAL22J, VAL29J, VAL38J, VAL39J, VAL521K, VAL6K
• K-L: ALA26K, ALA2L, ALA3L, ALA46K, ALA57K, ARG36K, ASN229L, ASN37K, ASP359L, ASP41K, ASP523L, ASP52K, ASP5L, ASP64K, CYS519L, GLN184K, GLU518L, GLU61K, GLU63K, GLY19K, GLY35K, GLY70L, ILE267K, ILE515L, ILE60K, LEU183K, LEU23K, LEU40K, LEU513L, LEU524L, LEU62K, LYS34K, LYS42K, LYS4L, LYS51K, LYS7L, MET114L, MET514L, MET520L, MET69L, MET73L, PRO47K, PRO525L, SER228L, THR266K, THR48K, THR50K, THR516L, THR517L, THR522L, TYR360L, VAL22K, VAL29K, VAL38K, VAL39K, VAL521L, VAL6L
• L-M: ALA26L, ALA2M, ALA3M, ALA46L, ALA57L, ARG36L, ASN229M, ASN37L, ASP359M, ASP41L, ASP523M, ASP52L, ASP5M, ASP64L, CYS519M, GLN184L, GLU518M, GLU61L, GLU63L, GLY35L, GLY70M, ILE267L, ILE515M, ILE60L, LEU183L, LEU23L, LEU40L, LEU513M, LEU524M, LEU62L, LYS34L, LYS42L, LYS4M, LYS51L, MET114M, MET514M, MET520M, MET69M, MET73M, PHE66M, PRO47L, PRO525M, SER228M, THR266L, THR48L, THR50L, THR516M, THR517M, THR522M, TYR360M, VAL22L, VAL29L, VAL38L, VAL39L, VAL521M, VAL6M
• M-N: ALA26M, ALA2N, ALA3N, ALA46M, ARG36M, ASN229N, ASN37M, ASP359N, ASP41M, ASP523N, ASP52M, ASP5N, ASP64M, CYS519N, GLN184M, GLU518N, GLU61M, GLU63M, GLY19M, GLY35M, GLY70N, ILE267M, ILE515N, ILE60M, LEU183M, LEU23M, LEU40M, LEU513N, LEU524N, LEU62M, LYS34M, LYS42M, LYS4N, LYS51M, LYS7N, MET114N, MET514N, MET520N, MET69N, MET73N, PRO47M, PRO525N, SER228N, THR266M, THR48M, THR50M, THR516N, THR517N, THR522N, TYR360N, VAL22M, VAL29M, VAL38M, VAL39M, VAL521N, VAL6N