3C5Y
crystal structure of a putative ribose 5-phosphate isomerase (saro_3514) from novosphingobium aromaticivorans dsm at 1.81 a resolution
Total interactions analyzed 120
Total true interactions 40
Strongest Interaction Chains E-P
Int. Res. 8
Norm. En. per Res. -5.7907
Hub Node A(6)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -57.3215 -29.1152 -371.739 -458.1757 166 10 29 17556 7 30 18
A-C -36.4384 -12.4693 -135.069 -183.9767 53 6 8 5450 4 14 17
A-D -6.2077 0.0 -80.9153 -87.123 37 1 0 3107 0 6 2
A-G 0.0 0.0 -0.0786 -0.0786 8 0 0 53 0 8 6
A-H -2.2147 0.0 -24.4192 -26.6339 29 0 0 1486 0 10 5
A-J 0.0 9.2276 -0.8491 8.3785 9 0 0 154 0 6 5
B-C 0.0 0.0 -86.3812 -86.3812 39 2 0 3201 0 6 2
B-D -31.8756 -12.1687 -112.656 -156.7003 52 3 5 4937 4 12 17
B-G 0.0 0.0 -25.3446 -25.3446 31 0 0 1572 0 10 6
B-H 0.0 0.0 -0.064 -0.064 6 0 0 27 0 6 4
B-J -10.9568 -10.9527 -8.9183 -30.8278 12 0 0 451 2 11 14
C-D -64.9744 -29.0916 -384.512 -478.578 167 18 29 17966 6 30 18
C-K 0.0 -23.121 -14.7579 -37.8789 19 0 0 755 0 13 14
E-F -61.091 -23.7176 -385.171 -469.9796 169 12 28 18126 6 30 18
E-G -33.3592 -9.8632 -137.027 -180.2494 54 6 8 5525 4 12 16
E-H 0.0 0.0 -91.4577 -91.4577 38 1 0 3237 0 6 2
E-M -13.4357 -17.0499 -39.2728 -69.7584 24 5 0 1637 1 10 13
E-P -4.7922 -30.8523 -10.681 -46.3254 8 1 0 329 2 6 8
F-G 0.0 0.0 -90.4837 -90.4837 38 1 0 3147 0 6 2
F-H -34.3261 -9.567 -122.614 -166.5071 50 5 7 5353 4 13 18
F-M 0.0 0.0 -0.8301 -0.8301 4 0 0 72 0 6 5
G-H -69.089 -28.4835 -378.934 -476.5064 165 16 29 17985 7 30 18
G-J 0.0 -2.1043 -71.4978 -73.6021 43 1 1 2909 0 9 10
G-P 0.0 0.0 -0.6081 -0.6081 13 0 0 117 0 10 9
I-J -60.6493 -32.2015 -379.74 -472.5907 167 14 29 17729 7 30 19
I-K 0.0 0.0 -92.2692 -92.2692 39 0 0 3262 0 6 2
I-L -32.9987 -13.0982 -134.612 -180.7089 55 8 8 5594 4 15 18
I-O 0.0 -2.8377 -0.3188 -3.1565 10 0 0 76 0 9 7
I-P 0.0 0.0 -0.1872 -0.1872 5 0 0 40 0 0 1
J-K -36.0806 -12.4268 -110.175 -158.6824 51 8 7 5113 4 14 18
J-L 0.0 0.0 -89.2396 -89.2396 39 0 0 3183 0 6 2
J-O 0.0 0.0 -20.046 -20.046 22 0 0 1393 0 7 7
J-P 0.0 -4.0417 -0.247 -4.2887 10 0 0 79 0 8 5
K-L -59.2339 -24.6306 -377.074 -460.9386 166 11 28 17995 6 30 18
M-N -51.9453 -24.9467 -382.122 -459.014 167 12 29 17616 5 30 18
M-O -7.415 0.0 -73.4704 -80.8854 36 3 0 2890 0 6 2
M-P -35.3943 -8.1019 -128.69 -172.1862 52 7 8 5464 4 12 18
N-O -21.96 -12.0187 -88.5262 -122.5049 52 3 5 4307 4 12 18
N-P -5.6031 0.0 -85.635 -91.2381 38 1 0 3218 0 6 2
O-P -66.0116 -37.0212 -369.854 -472.8868 163 12 27 17277 6 30 19