3C5M

crystal structure of oligogalacturonate lyase (vpa0088) from vibrio parahaemolyticus. northeast structural genomics consortium target vpr199

• Total interactions analyzed: 3
• Total true interactions: 2
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 54
  • Norm. En. per Res.: -3.8751
• Hub Node: A(1)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-55.9627	-11.7891	-141.504	-209.2558	54	11	0	5575	0	8	15
B-C	-14.9041	-2.9681	-67.4572	-85.3294	70	1	2	3695	4	44	45

Interface residues

• A-B: ARG25A, ARG25B, ASN10A, ASN10B, ASN66A, ASN66B, ASP16A, ASP16B, ASP381A, GLN20A, GLN20B, GLN70A, GLN70B, GLN71A, GLN71B, GLU12A, GLU12B, GLU372A, GLU372B, GLU68A, GLU68B, ILE7B, LEU67A, LEU67B, LEU9A, LEU9B, LYS22A, LYS22B, LYS387A, PHE11A, PHE11B, PHE14A, PHE14B, PHE371A, PHE371B, SER17A, SER17B, THR13A, THR13B, THR19A, THR24A, THR24B, THR69A, THR69B, THR8A, THR8B, TYR378A, VAL15A, VAL15B, VAL21A, VAL21B, VAL23A, VAL23B, VAL6B
• B-C: ASN100B, ASN100C, ASN103B, ASN103C, ASN59B, ASN59C, ASP108B, ASP108C, ASP121B, ASP121C, GLN115B, GLN115C, GLU101B, GLU101C, GLU113B, GLU113C, GLU114B, GLU114C, GLU122B, GLU122C, GLU176B, GLU176C, GLU179B, GLU179C, GLU77B, GLU77C, GLY126B, GLY126C, GLY178B, GLY178C, GLY78B, GLY78C, GLY80B, GLY80C, LEU102B, LEU102C, LEU104B, LEU104C, LEU112B, LEU112C, LEU180B, LEU180C, LYS125B, LYS125C, LYS146B, LYS146C, LYS3B, LYS3C, LYS79B, LYS79C, LYS99B, LYS99C, THR111B, THR111C, THR119B, THR119C, THR177B, THR177C, TRP124B, TRP124C, TRP149B, TRP149C, TYR118B, TYR118C, TYR97B, TYR97C, VAL116B, VAL116C, VAL120B, VAL120C