3BY7

crystal structure of a protein structurally similar to sm/lsm-like rna-binding proteins (jcvi_pep_1096686650277) from uncultured marine organism at 2.60 a resolution

• Total interactions analyzed: 10
• Total true interactions: 5
• Strongest Interaction:
  • Chains: B-D
  • Int. Res.: 63
  • Norm. En. per Res.: -3.5486
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-28.3541	14.2895	-146.24	-160.3046	60	10	5	6747	2	14	13
A-C	-19.5604	-0.6944	-172.882	-193.1368	63	8	6	6901	0	14	13
B-D	-55.057	7.3583	-175.865	-223.5637	63	13	6	7258	2	15	14
C-E	-22.1279	5.7459	-128.882	-145.264	58	5	4	6019	0	11	11
D-E	-39.0733	6.5026	-102.868	-135.4388	58	5	4	5291	0	14	13

Interface residues

• A-B: ARG8B, ASP14B, ASP57A, ASP58A, ASP64A, ASP64B, ASP65B, ASP76B, ASP77B, GLN46B, GLN53A, GLU13A, GLU13B, GLU60A, GLY12B, ILE15A, ILE15B, ILE16B, ILE26A, ILE28A, ILE34B, ILE35B, ILE61A, ILE63A, ILE69B, ILE6B, ILE71B, ILE78B, ILE79B, LEU25A, LEU47B, LEU9A, LEU9B, LYS5B, LYS67A, LYS67B, LYS75B, PRO36B, PRO51A, PRO54A, PRO74B, SER66A, SER66B, SER73B, THR11A, THR11B, THR56A, THR70B, THR72B, TRP52A, TYR55A, VAL10A, VAL10B, VAL33A, VAL33B, VAL45B, VAL48B, VAL62A, VAL68A, VAL68B
• A-C: ARG8A, ASP14A, ASP57C, ASP58C, ASP64A, ASP64C, ASP65A, ASP76A, ASP77A, GLN46A, GLN53C, GLU13A, GLU13C, GLU60C, GLY12A, GLY12C, ILE15A, ILE15C, ILE16A, ILE26C, ILE28C, ILE34A, ILE35A, ILE61C, ILE63C, ILE69A, ILE6A, ILE71A, ILE78A, ILE79A, LEU25C, LEU47A, LEU49A, LEU9A, LEU9C, LYS59C, LYS5A, LYS67A, LYS67C, LYS75A, PRO36A, PRO51C, PRO54C, PRO74A, SER66A, SER66C, SER73A, THR11A, THR11C, THR56C, THR70A, THR72A, TRP52C, TYR55C, VAL10A, VAL10C, VAL33A, VAL33C, VAL45A, VAL48A, VAL62C, VAL68A, VAL68C
• B-D: ALA31B, ARG8D, ASP14D, ASP57B, ASP58B, ASP64B, ASP64D, ASP65D, ASP76D, ASP77D, GLN53B, GLU13B, GLU13D, GLU60B, GLY12B, GLY12D, ILE15B, ILE15D, ILE16D, ILE26B, ILE28B, ILE34D, ILE35D, ILE61B, ILE63B, ILE69D, ILE6D, ILE71D, ILE78D, ILE79D, LEU25B, LEU47D, LEU49D, LEU9B, LEU9D, LYS59B, LYS5D, LYS67B, LYS67D, LYS75D, PRO36D, PRO51B, PRO54B, PRO74D, SER66B, SER66D, SER73D, THR11B, THR11D, THR56B, THR70D, THR72D, TRP52B, TYR55B, VAL10B, VAL10D, VAL33B, VAL33D, VAL45D, VAL48D, VAL62B, VAL68B, VAL68D
• C-E: ARG8C, ASP14C, ASP57E, ASP58E, ASP64C, ASP64E, ASP65C, ASP76C, GLN46C, GLN53E, GLU13C, GLU13E, GLU60E, GLY12C, GLY12E, ILE15C, ILE15E, ILE16C, ILE26E, ILE28E, ILE34C, ILE35C, ILE61E, ILE63E, ILE69C, ILE6C, ILE71C, ILE78C, ILE79C, LEU25E, LEU47C, LEU9C, LEU9E, LYS59E, LYS5C, LYS67C, LYS67E, LYS75C, PRO36C, PRO54E, PRO74C, SER66C, SER66E, SER73C, THR11C, THR11E, THR56E, THR70C, THR72C, TRP52E, TYR55E, VAL10C, VAL10E, VAL45C, VAL48C, VAL62E, VAL68C, VAL68E
• D-E: ARG8E, ASP14E, ASP57D, ASP58D, ASP64D, ASP65E, ASP76E, ASP77E, GLN53D, GLU13D, GLU13E, GLU60D, GLY12D, GLY12E, ILE15D, ILE15E, ILE16E, ILE26D, ILE28D, ILE34E, ILE35E, ILE61D, ILE63D, ILE69E, ILE6E, ILE71E, ILE78E, ILE79E, LEU25D, LEU47E, LEU9D, LEU9E, LYS59D, LYS5E, LYS67D, LYS67E, LYS75E, PRO36E, PRO54D, PRO74E, SER66D, SER66E, SER73E, THR11D, THR11E, THR56D, THR70E, THR72E, TRP52D, TYR55D, VAL10D, VAL10E, VAL33E, VAL45E, VAL48E, VAL62D, VAL68D, VAL68E