3BP9
structure of b-tropic mlv capsid n-terminal domain
Total interactions analyzed 276
Total true interactions 59
Strongest Interaction Chains Q-T
Int. Res. 48
Norm. En. per Res. -3.2143
Hub Node A(6)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -16.3441 6.006 -119.948 -130.286 67 9 0 4974 0 10 10
A-E 0.0 0.0 -0.0051 -0.0051 3 0 0 4 0 0 0
A-F -7.3733 4.0057 -133.445 -136.8126 78 5 0 5585 0 11 11
A-I 0.0 0.0 -12.6386 -12.6386 12 0 0 470 0 1 0
A-S 0.0 5.0245 -2.4466 2.5779 8 0 0 253 0 4 5
A-Y 0.0 17.3965 -17.3693 0.0272 27 1 0 1008 0 10 14
B-C -12.6356 -13.0416 -136.07 -161.7473 75 7 1 5466 0 11 11
B-X 0.0 18.3095 -21.9468 -3.6373 32 1 0 1164 0 10 14
B-Y 0.0 6.2697 -3.0105 3.2591 9 0 0 170 1 4 5
C-D -17.8108 -11.5731 -132.718 -162.102 79 9 1 5598 0 12 11
C-E 0.0 0.0 -0.0023 -0.0023 2 0 0 2 0 0 0
C-V 0.0 7.1615 -9.8094 -2.6479 22 0 0 688 0 7 13
C-X -2.5679 1.4502 -4.4636 -5.5813 10 0 0 345 2 4 5
D-E -30.4343 -7.6698 -134.052 -172.1561 82 14 1 5848 0 10 10
D-H 0.0 45.0206 -8.6979 36.3227 19 1 0 500 0 9 10
D-U 0.0 43.4548 -15.231 28.2238 22 0 0 875 0 9 11
D-V 0.0 8.3618 -5.8564 2.5054 15 0 0 448 0 4 5
E-F -19.3007 4.0898 -122.842 -138.0529 77 8 1 5508 0 13 10
E-H -5.7468 0.5618 -15.4351 -20.6202 17 0 0 727 0 4 3
E-I 0.0 -24.8501 -23.9241 -48.7742 28 0 0 1066 1 5 5
E-S 0.0 0.0 -0.0022 -0.0022 2 0 0 1 0 0 0
E-T 0.0 19.3735 -7.6204 11.7531 18 0 0 478 0 5 12
E-U -3.7476 -1.7435 -10.0491 -15.5401 17 1 0 699 1 4 5
F-I 0.0 -28.6675 -19.2624 -47.9299 27 2 0 1036 2 5 7
F-S 0.0 36.4075 -24.0966 12.3109 28 1 0 1119 0 10 14
F-T 0.0 0.1219 -7.5156 -7.3937 11 0 0 351 2 4 5
G-H -13.5685 3.6799 -113.121 -123.0096 71 9 0 4881 0 11 10
G-K 0.0 0.0 -0.0101 -0.0101 4 0 0 6 0 0 0
G-L -13.8157 4.1981 -125.333 -134.9506 76 12 0 5598 0 10 10
H-I -15.2052 -9.0591 -126.067 -150.3313 78 8 1 5421 0 12 11
I-J -13.9601 -10.7379 -113.702 -138.4 80 8 1 5555 0 12 11
I-K 0.0 0.0 -0.0005 -0.0005 2 0 0 1 0 0 0
J-K -14.8543 -8.8016 -144.292 -167.9479 78 8 1 5946 0 11 10
K-L -14.5578 4.3491 -124.494 -134.7027 78 8 1 5524 0 13 10
K-S 0.0 0.0 -0.0774 -0.0774 2 0 0 8 0 0 0
K-T 0.0 0.0 933.021 933.021 32 70 0 1149 0 0 0
K-U 0.0 0.0 -0.0805 -0.0805 2 0 0 13 0 0 0
M-N -26.4031 -12.3955 -144.105 -182.9036 81 10 1 6204 1 11 11
M-R -11.4591 2.5362 -122.433 -131.3559 76 5 1 5003 0 10 9
M-T 0.0 0.0 -0.4949 -0.4949 6 0 0 87 0 0 0
N-O -29.1579 1.7317 -128.015 -155.4411 73 5 0 5126 0 13 10
N-R 0.0 0.0 -0.1308 -0.1308 4 0 0 36 0 0 0
N-T 0.0 0.0 -14.8513 -14.8513 8 1 0 544 0 0 0
O-P -16.2321 -14.3114 -129.225 -159.7685 69 12 1 5199 1 9 11
O-S 0.0 0.0 -0.0028 -0.0028 2 0 0 4 0 0 2
P-Q -17.2173 2.9668 -128.25 -142.5005 76 9 1 5324 0 11 10
P-S 0.0 -17.5008 -21.2746 -38.7754 24 0 0 1100 1 8 5
P-T -3.4853 -24.8553 -22.4433 -50.7839 25 0 0 916 1 5 4
Q-R -4.8709 4.9813 -118.724 -118.6136 71 5 1 5035 0 11 12
Q-T -36.1371 -37.2606 -80.8895 -154.2872 48 6 0 3435 1 7 8
R-T -3.6695 0.0 -29.8155 -33.485 17 1 0 1072 0 0 0
S-T -18.314 2.2077 -137.234 -153.3402 79 13 1 5873 0 12 10
S-Y -6.2945 2.7463 -151.557 -155.1052 79 6 1 5639 0 11 10
T-U -19.4491 0.3294 -116.338 -135.4576 80 14 1 5387 0 13 11
T-Y 0.0 0.0 -0.3293 -0.3293 8 0 0 68 0 0 0
U-V -21.6709 -1.3337 -135.108 -158.1125 81 8 1 5436 0 9 11
V-X -11.1229 4.8492 -138.17 -144.4437 78 9 1 5745 0 11 11
V-Y 0.0 0.0 -0.0208 -0.0208 2 0 0 12 0 0 0
X-Y -19.4838 4.3522 -118.584 -133.7155 75 5 1 5232 0 12 11