3BD5

crystal structure of single domain vl of an anti-dna binding antibody 3d8 scfv and its active site revealed by complex structures of a small molecule and metals

• Total interactions analyzed: 1
• Total true interactions: 1
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 61
  • Norm. En. per Res.: -3.0776
• Hub Node: A(1)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-33.7769	-22.248	-131.711	-187.7359	61	8	0	5296	3	12	13

Interface residues

• A-B: ALA170B, ALA173A, ARG218A, ARG225A, ASP224A, ASP234B, CYS181B, GLN164B, GLN243A, GLU175A, GLU175B, GLY174A, GLY228A, GLY230A, GLY230B, ILE239A, ILE239B, LEU169B, LEU237A, LEU237B, LEU268B, LYS176A, LYS176B, LYS182B, LYS271A, LYS271B, MET179B, PHE226A, PHE235B, PRO166B, PRO223A, SER163B, SER165B, SER167B, SER168B, SER172A, SER180B, SER183B, SER184B, SER229A, SER229B, SER231B, SER240A, SER240B, SER241A, THR178A, THR178B, THR227A, THR233B, THR236A, THR236B, THR238A, THR238B, THR266B, TRP199B, VAL171A, VAL171B, VAL177A, VAL177B, VAL242A, VAL242B