3B9V

crystal structure of an autonomous vh domain

• Total interactions analyzed: 6
• Total true interactions: 5
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 59
  • Norm. En. per Res.: -1.9609
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-10.0577	0.0	-48.9535	-59.0112	36	1	2	2105	0	1	2
A-C	-21.184	0.0	-94.5112	-115.6952	59	4	1	4648	0	4	6
A-D	0.0	0.0	-0.0043	-0.0043	3	0	0	5	0	0	0
B-D	0.0	0.0	-41.4775	-41.4775	48	1	0	1957	0	2	5
C-D	-8.0941	0.0	-48.128	-56.2221	37	0	2	2081	0	1	1

Interface residues

• A-B: ALA40B, ALA88B, ARG39B, ARG58A, ASN54A, GLN105B, GLU6B, GLY104B, GLY106B, GLY10B, GLY42B, GLY55A, GLY65A, GLY8B, GLY9B, ILE51A, ILE69A, LEU108B, LEU11B, LYS43B, PRO41B, PRO52A, SER112B, THR107B, THR110B, THR53A, THR57A, THR68A, TYR33A, TYR52A, TYR56A, TYR59A, TYR90B, TYR91B, VAL109B, VAL89B
• A-C: ARG19A, ARG19C, ARG66A, ARG66C, ASN82A, ASN82C, GLN13A, GLN13C, GLN81A, GLN81C, GLU6C, GLY10A, GLY10C, GLY15A, GLY15C, GLY16A, GLY16C, GLY65A, GLY65C, GLY8A, GLY8C, GLY9A, GLY9C, LEU108A, LEU108C, LEU11A, LEU11C, LEU18A, LEU18C, LEU20A, LEU20C, LEU80A, LEU80C, LEU82A, LEU82C, LYS75A, LYS75C, MET82A, MET82C, PRO14A, PRO14C, SER17A, SER17C, SER21A, SER21C, SER7A, SER7C, SER82A, SER82C, THR107A, THR107C, THR110A, THR110C, TYR79A, TYR79C, VAL109A, VAL109C, VAL12A, VAL12C
• A-D: ASP72A, GLN13D, SER74A
• B-D: ARG19B, ARG19D, ARG66B, ARG66D, ASN82B, ASN82D, GLN13B, GLN13D, GLN81B, GLN81D, GLY10D, GLY15B, GLY15D, GLY16B, GLY16D, GLY65B, GLY65D, GLY8B, GLY8D, GLY9B, GLY9D, LEU18B, LEU18D, LEU20B, LEU20D, LEU80B, LEU80D, LEU82B, LEU82D, LYS75B, LYS75D, MET82B, MET82D, SER17B, SER17D, SER21B, SER21D, SER70D, SER7B, SER7D, SER82B, SER82D, THR68B, THR68D, TYR79B, TYR79D, VAL12B, VAL12D
• C-D: ALA40D, ALA88D, ARG39D, ARG58C, ASN54C, ASP31C, GLN105D, GLU6D, GLY104D, GLY106D, GLY10D, GLY42D, GLY55C, GLY65C, GLY9D, ILE51C, ILE69C, LEU108D, LEU11D, LYS30C, LYS64C, PRO41D, SER112D, SER70C, THR107D, THR110D, THR53C, THR57C, THR68C, THR87D, TYR52C, TYR56C, TYR59C, TYR90D, TYR91D, VAL109D, VAL89D