3AX2

crystal structure of rat tom20-aldh presequence complex: a disulfide- tethered complex with a non-optimized, long linker

• Total interactions analyzed: 28
• Total true interactions: 15
• Strongest Interaction:
  • Chains: A-F
  • Int. Res.: 38
  • Norm. En. per Res.: -4.4757
• Hub Node: A(6)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-5.0625	-10.7586	694.971	679.1499	41	7	1	5009	0	8	4
A-C	0.0	12.7568	-115.29	-102.5332	61	1	12	4937	0	19	23
A-D	0.0	0.0	-2.1734	-2.1734	8	0	0	154	0	1	0
A-E	-9.1036	0.0	-12.0888	-21.1924	12	2	0	420	0	4	6
A-F	-23.0743	-68.3372	-78.6653	-170.0768	38	13	4	3904	2	7	1
A-G	0.0	0.0	-0.0006	-0.0006	2	0	0	2	0	2	1
B-C	0.0	0.0	-1.6892	-1.6892	8	0	0	141	0	1	0
B-E	-13.0381	-33.8689	-74.1035	-121.0105	39	5	4	3837	0	7	1
B-F	0.0	0.0	-62.2572	-62.2572	24	3	0	2167	0	0	1
C-D	-8.7222	-38.7533	691.778	644.3025	44	14	1	5121	2	7	4
C-G	-6.7061	0.0	-133.07	-139.7761	50	4	7	4863	0	2	1
C-H	0.0	0.0	-0.0458	-0.0458	3	0	0	16	0	0	0
E-F	-6.4942	-0.958	556.615	549.1628	40	5	1	4729	0	8	2
E-H	0.0	0.0	-0.0984	-0.0984	6	0	0	27	0	1	0
G-H	0.0	-2.7964	556.92	554.1236	40	7	2	4796	0	8	4

Interface residues

• A-B: ALA22B, ALA63A, ALA65A, ALA96A, ARG14B, ARG17B, CYS100A, CYS26B, GLN102A, GLN104A, GLN105A, GLN67A, GLN75A, GLU64A, GLU72A, GLY101A, GLY12B, GLY23B, GLY25B, ILE74A, ILE97A, LEU106A, LEU107A, LEU15B, LEU18B, LEU19B, LEU60A, LEU71A, LYS61A, LYS68A, PHE69A, PHE70A, PRO103A, PRO13B, SER16B, SER20B, SER24B, TYR21B, VAL109A, VAL66A, VAL99A
• A-C: ALA63A, ALA63C, ALA65A, ALA65C, ALA96A, ALA96C, ALA98A, ALA98C, ASN95A, ASN95C, ASP59A, ASP59C, ASP62A, ASP62C, ASP91A, ASP91C, CYS100A, CYS100C, GLN102A, GLN102C, GLN67A, GLN67C, GLU64A, GLU64C, GLU72A, GLU72C, GLU73A, GLU73C, GLY101A, GLY101C, GLY57A, GLY57C, HIS92A, HIS92C, ILE97A, ILE97C, LEU126A, LEU126C, LEU60A, LEU60C, LEU76A, LYS61A, LYS61C, LYS68A, LYS68C, LYS88A, LYS88C, PHE69A, PHE69C, PHE70A, PHE70C, PRO103A, PRO103C, SER58A, SER58C, THR94A, THR94C, VAL66A, VAL66C, VAL99A, VAL99C
• A-D: ALA65A, ASP62A, CYS26D, GLY25D, LYS61A, SER58A, TYR21D, VAL66A
• A-E: GLN67A, GLN75A, GLN75E, GLU72A, GLU72E, GLU78A, GLU78E, ILE74A, ILE74E, LEU71A, LEU71E, THR113E
• A-F: ALA22F, ALA82A, ALA96A, ARG14F, ARG17F, GLN105A, GLN108A, GLN111A, GLN112A, GLN75A, GLN83A, GLU72A, GLU73A, GLU78A, GLU79A, GLY12F, GLY77A, ILE74A, ILE97A, LEU106A, LEU107A, LEU110A, LEU114A, LEU122A, LEU15F, LEU18F, LEU19F, LEU71A, LEU76A, LEU80A, LEU81A, LEU93A, PHE70A, PRO13F, SER16F, SER20F, THR113A, VAL109A
• A-G: LYS68A, LYS68G
• B-C: ALA65C, ASP62C, CYS26B, GLY25B, LYS61C, SER58C, TYR21B, VAL66C
• B-E: ALA22B, ALA82E, ALA96E, ARG14B, ARG17B, GLN105E, GLN108E, GLN111E, GLN112E, GLN75E, GLN83E, GLU73E, GLU78E, GLU79E, GLY12B, GLY77E, GLY84E, ILE74E, ILE97E, LEU106E, LEU107E, LEU110E, LEU114E, LEU122E, LEU15B, LEU18B, LEU19B, LEU71E, LEU76E, LEU80E, LEU81E, LEU93E, PHE70E, PRO115E, PRO13B, SER16B, SER20B, THR113E, VAL109E
• B-F: ALA22B, ALA22F, ARG17B, ARG17F, CYS26B, CYS26F, GLY23B, GLY23F, GLY25B, GLY25F, LEU15B, LEU15F, LEU18B, LEU18F, LEU19B, LEU19F, SER16B, SER16F, SER20B, SER20F, SER24B, SER24F, TYR21B, TYR21F
• C-D: ALA22D, ALA63C, ALA65C, ALA96C, ALA98C, ARG14D, ARG17D, CYS100C, CYS26D, GLN102C, GLN104C, GLN105C, GLN108C, GLN67C, GLN75C, GLU64C, GLU72C, GLY101C, GLY12D, GLY23D, GLY25D, ILE74C, ILE97C, LEU106C, LEU107C, LEU110C, LEU15D, LEU18D, LEU19D, LEU60C, LEU71C, LYS61C, LYS68C, PHE69C, PHE70C, PRO103C, PRO13D, SER16D, SER20D, SER24D, TYR21D, VAL109C, VAL66C, VAL99C
• C-G: ALA63G, ALA65G, ALA96G, ALA98G, ASN95G, ASP62G, ASP91G, CYS100G, GLN102G, GLN104C, GLN105C, GLN108C, GLN111C, GLN112C, GLN120C, GLN67G, GLN75G, GLU64G, GLU72G, GLU73G, GLY101G, GLY77G, HIS92G, ILE74G, ILE97C, ILE97G, LEU106C, LEU107C, LEU110C, LEU122C, LEU123C, LEU126C, LEU126G, LEU71G, LEU76G, LEU80G, LEU93G, LYS125C, LYS68G, MET121C, PHE119C, PHE69G, PHE70G, PRO103C, PRO116C, THR124C, THR94G, VAL109C, VAL66G, VAL99G
• C-H: CYS26H, GLN120C, TYR21H
• E-F: ALA22F, ALA63E, ALA65E, ALA96E, ARG14F, ARG17F, ASP62E, CYS100E, CYS26F, GLN102E, GLN104E, GLN105E, GLN67E, GLN75E, GLU64E, GLU72E, GLY101E, GLY12F, GLY23F, GLY25F, ILE74E, ILE97E, LEU106E, LEU107E, LEU15F, LEU18F, LEU19F, LEU71E, LYS68E, PHE69E, PHE70E, PRO103E, PRO13F, SER16F, SER20F, SER24F, TYR21F, VAL109E, VAL66E, VAL99E
• E-H: ALA82E, ARG14H, GLN83E, GLY84E, LEU81E, TYR86E
• G-H: ALA22H, ALA63G, ALA65G, ALA96G, ARG14H, ARG17H, ASP62G, CYS100G, CYS26H, GLN102G, GLN104G, GLN105G, GLN108G, GLN67G, GLN75G, GLU64G, GLU72G, GLY101G, GLY23H, GLY25H, ILE74G, ILE97G, LEU106G, LEU107G, LEU110G, LEU18H, LEU19H, LEU71G, LYS61G, LYS68G, PHE69G, PHE70G, PRO103G, SER16H, SER20H, SER24H, TYR21H, VAL109G, VAL66G, VAL99G