3AOG
crystal structure of glutamate dehydrogenase (gdhb) from thermus thermophilus (glu bound form)
Total interactions analyzed 66
Total true interactions 35
Strongest Interaction Chains E-F
Int. Res. 144
Norm. En. per Res. -4.021
Hub Node A(8)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -93.7456 -101.6932 -395.494 -590.9328 150 21 10 17144 4 45 37
A-C -39.5963 -57.8879 -208.058 -305.5422 97 6 7 9122 3 18 22
A-D 0.0 0.0 -8.8679 -8.8679 31 0 0 738 0 13 14
A-E -15.6849 -35.0956 -238.161 -288.9414 99 5 7 9195 1 18 22
A-F 0.0 0.0 -11.4332 -11.4332 4 0 0 370 0 0 0
A-G 0.0 56.6432 -87.3524 -30.7092 74 2 0 3556 2 46 47
A-H 0.0 0.2236 -12.4942 -12.2706 36 0 1 1093 1 24 22
A-I -7.4506 -19.3315 -59.0309 -85.813 46 3 0 2007 6 31 25
B-C 0.0 0.0 -10.7313 -10.7313 4 0 0 362 0 0 0
B-D -43.3597 -50.9772 -237.856 -332.193 98 8 7 9223 2 18 22
B-E 0.0 0.0 -7.8971 -7.8971 28 0 0 657 0 13 14
B-F -22.0002 -43.0157 -232.949 -297.9649 97 9 7 9163 1 19 21
C-D -70.8058 -98.7315 -397.216 -566.7532 143 18 10 17260 1 42 35
C-E -13.574 -39.4886 -235.595 -288.6577 100 3 7 9220 2 20 22
C-F 0.0 0.0 -10.6649 -10.6649 30 0 0 808 0 14 14
C-G 0.0 -17.4893 -15.5155 -33.0048 37 0 1 1171 4 22 23
D-E 0.0 0.0 -10.7377 -10.7377 4 0 0 360 0 0 0
D-F -24.2857 -59.651 -227.486 -311.4228 96 8 7 9190 2 18 22
E-F -82.8329 -111.2517 -384.946 -579.0307 144 25 11 17065 4 47 38
E-G -5.6415 -20.8333 -56.0443 -82.5191 48 1 0 2079 3 30 26
G-H -17.1938 -27.5563 -234.193 -278.9431 101 5 7 9257 1 18 22
G-I -8.1343 -43.2121 -229.797 -281.1435 99 8 7 9083 2 18 22
G-J -87.7997 -88.1629 -378.656 -554.6186 149 25 10 17046 0 47 36
G-K 0.0 0.0 -10.4527 -10.4527 4 0 0 366 0 0 0
G-L 0.0 0.0 -7.4506 -7.4506 30 0 0 631 0 14 14
H-I -26.1723 -47.2701 -223.489 -296.9313 94 6 7 8956 2 19 22
H-J 0.0 0.0 -10.7847 -10.7847 4 2 0 363 0 0 0
H-K 0.0 0.0 -9.2132 -9.2132 32 0 0 690 0 13 15
H-L -77.59 -86.7484 -380.074 -544.4124 148 19 10 16788 1 44 34
I-J 0.0 0.0 -6.4921 -6.4921 28 0 0 531 0 14 14
I-K -84.7948 -111.5184 -388.745 -585.0583 146 17 10 17193 5 46 38
I-L 0.0 0.0 -12.7251 -12.7251 4 0 0 381 0 0 0
J-K -27.7736 -51.0677 -233.414 -312.2553 96 9 7 9249 2 18 20
J-L -18.537 -33.5501 -230.318 -282.405 99 12 7 9114 1 19 22
K-L -21.723 -55.0704 -239.731 -316.5244 102 12 7 9504 3 18 22