3AJF

structural insigths into dsrna binding and rna silencing suppression by ns3 protein of rice hoja blanca tenuivirus

• Total interactions analyzed: 6
• Total true interactions: 6
• Strongest Interaction:
  • Chains: A-D
  • Int. Res.: 95
  • Norm. En. per Res.: -3.6331
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	-9.8343	-1.4737	-11.308	17	0	0	227	0	5	6
A-C	0.0	49.262	-92.7785	-43.5165	39	1	0	3569	0	25	29
A-D	-37.7107	-20.4159	-287.016	-345.1426	95	5	6	12481	3	22	17
B-C	-26.0143	-14.3691	-288.462	-328.8454	97	5	6	12524	1	22	17
B-D	0.0	63.2596	-101.786	-38.5264	40	4	0	3777	0	25	29
C-D	0.0	-4.4532	-1.7122	-6.1654	15	0	0	255	0	4	6

Interface residues

• A-B: ARG50A, ARG50B, GLU70A, GLU70B, HIS51A, HIS51B, LYS77A, LYS77B, PRO113A, PRO113B, PRO52A, PRO52B, SER53A, SER53B, SER73A, SER73B, VAL74B
• A-C: ARG50A, ARG50C, ARG87A, ARG87C, ASN48A, ASN48C, ASP55A, ASP55C, ASP88A, ASP88C, GLU49A, GLU49C, HIS51A, HIS51C, HIS85A, HIS85C, ILE46A, ILE46C, ILE80A, LEU47A, LEU47C, LYS77A, LYS77C, LYS86A, LYS86C, PHE54A, PHE54C, PRO52A, PRO52C, SER53A, SER53C, SER78A, SER78C, SER84A, SER84C, TRP81A, TRP81C, VAL74A, VAL74C
• A-D: ALA79A, ALA79D, ARG50A, ARG50D, ARG87A, ARG87D, ARG94A, ARG94D, ASN71A, ASN71D, ASP68A, ASP68D, ASP88A, ASP88D, CYS30D, CYS99A, CYS99D, GLU106A, GLU106D, GLU110A, GLU110D, GLU70A, GLU70D, GLY91A, GLY91D, HIS85A, HIS85D, HIS92A, ILE80A, ILE80D, LEU100A, LEU111A, LEU111D, LEU28D, LEU33A, LEU33D, LEU72A, LEU72D, LEU76A, LEU76D, LEU83A, LEU83D, LEU89A, LEU89D, LEU95A, LEU95D, LEU97A, LEU97D, LYS112A, LYS112D, LYS31A, LYS77A, LYS77D, LYS86A, LYS86D, PHE108A, PHE108D, PHE75A, PHE75D, PRO113A, PRO113D, PRO69A, PRO69D, PRO90A, PRO96A, PRO96D, SER102A, SER102D, SER105A, SER105D, SER73A, SER73D, SER78A, SER78D, SER84A, SER84D, THR103A, THR103D, THR29D, THR98A, THR98D, TRP81A, TRP81D, TYR104A, TYR104D, TYR107A, TYR107D, TYR93A, TYR93D, VAL101A, VAL101D, VAL109A, VAL109D, VAL74A, VAL74D
• B-C: ALA79B, ALA79C, ARG50B, ARG50C, ARG87B, ARG87C, ARG94B, ARG94C, ASN71B, ASN71C, ASP68B, ASP68C, ASP88B, ASP88C, CYS30C, CYS99B, CYS99C, GLU106B, GLU106C, GLU110B, GLU110C, GLU70B, GLU70C, GLY91B, GLY91C, HIS85B, HIS85C, HIS92B, HIS92C, ILE80B, ILE80C, LEU100B, LEU100C, LEU111B, LEU111C, LEU28C, LEU33B, LEU33C, LEU72B, LEU72C, LEU76B, LEU76C, LEU83B, LEU83C, LEU89B, LEU89C, LEU95B, LEU95C, LEU97B, LEU97C, LYS112B, LYS112C, LYS31B, LYS77B, LYS77C, LYS86B, LYS86C, PHE108B, PHE108C, PHE75B, PHE75C, PRO113B, PRO113C, PRO69B, PRO69C, PRO90B, PRO90C, PRO96B, PRO96C, SER102B, SER102C, SER105B, SER105C, SER73B, SER73C, SER78B, SER78C, SER84B, SER84C, THR103B, THR103C, THR98B, THR98C, TRP81B, TRP81C, TYR104B, TYR104C, TYR107B, TYR107C, TYR93B, TYR93C, VAL101B, VAL101C, VAL109B, VAL109C, VAL74B, VAL74C
• B-D: ARG50B, ARG50D, ARG87B, ARG87D, ASN48B, ASN48D, ASP55B, ASP55D, ASP88B, ASP88D, GLU49B, GLU49D, HIS51B, HIS51D, HIS85B, HIS85D, ILE46B, ILE46D, ILE80D, LEU42B, LEU47B, LEU47D, LYS77B, LYS77D, LYS86B, LYS86D, PHE54B, PHE54D, PRO52B, PRO52D, SER53B, SER53D, SER78B, SER78D, SER84B, SER84D, TRP81B, TRP81D, VAL74B, VAL74D
• C-D: ARG50C, ARG50D, GLU70C, GLU70D, HIS51C, HIS51D, LYS77C, LYS77D, PRO113C, PRO113D, PRO52C, PRO52D, SER53C, SER53D, SER73D