2ZJS

crystal structure of secye translocon from thermus thermophilus with a fab fragment

• Total interactions analyzed: 6
• Total true interactions: 4
• Strongest Interaction:
  • Chains: Y-H
  • Int. Res.: 41
  • Norm. En. per Res.: -4.3452
• Hub Node: Y(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
Y-E	-8.4131	-13.9094	-366.456	-388.7786	136	15	25	17640	1	10	12
Y-H	-28.2148	-40.2568	-109.681	-178.1526	41	10	3	3984	2	1	2
Y-L	-14.6864	0.0	-92.4623	-107.1487	41	3	0	3499	0	2	0
H-L	-50.4359	-28.6279	-479.945	-559.0089	194	24	8	19322	2	15	11

Interface residues

• Y-E: ALA12E, ALA14E, ALA17E, ALA190Y, ALA222Y, ALA227Y, ALA229Y, ALA232Y, ALA233Y, ALA237Y, ALA26Y, ALA27Y, ALA32Y, ALA33E, ALA408Y, ALA40E, ALA4Y, ARG13E, ARG18E, ARG202Y, ARG239Y, ARG240Y, ARG24E, ARG29Y, ARG366Y, ARG53E, ARG69Y, ASN182Y, ASP410Y, ASP49E, GLN199Y, GLN235Y, GLN236Y, GLN26E, GLN32E, GLU15E, GLU195Y, GLU238Y, GLU25E, GLU29E, GLY181Y, GLY191Y, GLY230Y, GLY30E, GLY31Y, GLY406Y, GLY46E, HIS362Y, ILE175Y, ILE180Y, ILE187Y, ILE192Y, ILE200Y, ILE224Y, ILE241Y, ILE264Y, ILE34E, ILE34Y, ILE363Y, ILE44E, ILE56E, LEU16E, LEU186Y, LEU197Y, LEU19Y, LEU201Y, LEU221Y, LEU226Y, LEU22Y, LEU23Y, LEU25Y, LEU266Y, LEU30Y, LEU35E, LEU367Y, LEU369Y, LEU36E, LEU373Y, LEU39E, LEU401Y, LEU409Y, LEU412Y, LEU45E, LEU47E, LEU55E, LYS265Y, LYS3Y, MET1Y, MET231Y, MET42E, PHE189Y, PHE217Y, PHE228Y, PHE33Y, PHE359Y, PHE37E, PHE396Y, PHE41E, PHE52E, PHE5Y, PRO198Y, PRO22E, PRO263Y, SER365Y, THR20E, THR21Y, THR23E, THR31E, THR368Y, THR38E, THR411Y, THR50E, TRP196Y, TRP21E, TRP370Y, TRP6Y, TYR261Y, TYR28Y, TYR48E, VAL18Y, VAL193Y, VAL194Y, VAL19E, VAL225Y, VAL234Y, VAL24Y, VAL27E, VAL28E, VAL2Y, VAL364Y, VAL404Y, VAL405Y, VAL407Y, VAL415Y, VAL43E, VAL51E
• Y-H: ALA35H, ARG341Y, ARG351Y, ARG98H, ASN105H, ASN59H, GLU354Y, GLU361Y, GLU50H, GLY104H, GLY349Y, GLY353Y, GLY49H, HIS362Y, ILE347Y, ILE34H, ILE350Y, ILE363Y, ILE51H, LEU360Y, LEU52H, LYS358Y, LYS65H, PHE359Y, PRO100H, PRO348Y, PRO352Y, PRO355Y, SER55H, SER57H, SER99H, THR356Y, THR58H, TRP106H, TRP33H, TRP47H, TYR101H, TYR102H, TYR103H, TYR32H, VAL357Y
• Y-L: ALA246Y, ALA259Y, ARG239Y, ARG247Y, ARG351Y, ASN31L, ASN92L, ASP1L, ASP28L, GLN244Y, GLN258Y, GLN27L, GLN89L, GLN90L, GLY257Y, GLY344Y, GLY345Y, GLY349Y, GLY353Y, GLY68L, GLY91L, ILE29L, ILE2L, ILE347Y, ILE350Y, LEU94L, PHE346Y, PHE359Y, PRO242Y, PRO348Y, PRO352Y, PRO355Y, PRO95L, SER26L, SER30L, THR93L, TRP96L, TYR245Y, TYR32L, TYR50L, VAL243Y
• H-L: ALA130L, ALA131H, ALA135H, ALA136H, ALA174H, ALA35H, ALA97H, ARG211L, ARG219H, ARG98H, ASN105H, ASN137L, ASN138L, ASN139H, ASN161L, ASN210L, ASN212L, ASN34L, ASN59H, ASN61H, ASN92L, ASP107H, ASP165L, ASP167L, ASP170L, ASP1L, ASP220H, ASP41L, CYS134L, CYS146H, CYS214L, CYS88L, GLN111H, GLN124L, GLN137H, GLN177H, GLN1H, GLN37L, GLN38L, GLN39H, GLN3L, GLN6L, GLN89L, GLN90L, GLU123L, GLU213L, GLU46H, GLU50H, GLU62H, GLY100L, GLY101L, GLY104H, GLY110H, GLY112H, GLY128L, GLY129L, GLY133H, GLY145H, GLY150H, GLY158L, GLY168H, GLY42H, GLY42L, GLY44H, GLY49H, GLY57L, GLY91L, GLY99L, HIS170H, HIS43H, ILE117L, ILE216H, ILE48H, ILE48L, LEU125L, LEU130H, LEU136L, LEU144H, LEU147H, LEU160L, LEU176H, LEU179L, LEU180H, LEU181L, LEU183H, LEU33L, LEU45H, LEU46L, LEU47L, LEU54L, LEU94L, LYS149H, LYS169L, LYS207L, LYS214H, LYS215H, LYS38H, LYS39L, LYS45L, LYS63H, MET141H, MET175L, PHE118L, PHE135L, PHE139L, PHE172H, PHE209L, PHE64H, PHE87L, PHE98L, PRO100H, PRO119L, PRO120L, PRO129H, PRO132H, PRO173H, PRO95L, SER116L, SER121L, SER122L, SER126H, SER127L, SER131L, SER134H, SER162L, SER166H, SER167H, SER168L, SER174L, SER176L, SER177L, SER178H, SER184H, SER185H, SER186H, SER208L, SER56L, SER99H, SER9L, THR114L, THR126L, THR143H, THR164L, THR171H, THR172L, THR178L, THR180L, THR182H, THR182L, THR188H, THR43L, THR51L, THR58H, THR85L, THR93L, THR97L, TRP106H, TRP109H, TRP160H, TRP163L, TRP33H, TRP35L, TRP36H, TRP47H, TRP96L, TYR101H, TYR102H, TYR103H, TYR108H, TYR128H, TYR173L, TYR181H, TYR186L, TYR32L, TYR36L, TYR49L, TYR50L, TYR60H, TYR86L, TYR95H, VAL115L, VAL127H, VAL132L, VAL133L, VAL142H, VAL148H, VAL159L, VAL169H, VAL175H, VAL187H, VAL217H, VAL37H, VAL44L, VAL93H