2ZII

crystal structure of yeast vps74-n-term truncation variant

• Total interactions analyzed: 6
• Total true interactions: 5
• Strongest Interaction:
  • Chains: A-D
  • Int. Res.: 119
  • Norm. En. per Res.: -4.4677
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-13.4106	-38.5726	-272.879	-324.8622	89	7	13	10598	6	12	6
A-C	-29.3262	-28.2812	-149.749	-207.3564	85	8	1	5677	4	38	34
A-D	-101.8428	-123.2535	-306.563	-531.6593	119	17	3	11221	11	65	61
B-D	-27.5779	-85.0083	-177.236	-289.8222	79	8	2	6960	5	39	37
C-D	-28.604	-44.5703	-276.837	-350.0113	90	9	9	10782	7	13	8

Interface residues

• A-B: ALA185A, ALA185B, ALA207A, ALA207B, ALA262A, ALA262B, ARG181A, ARG181B, ARG183A, ARG195A, ARG79A, ARG79B, ASN200A, ASN200B, ASN267A, ASN267B, ASN89A, ASN89B, ASP205A, ASP205B, GLN179A, GLU182A, GLU182B, GLU197A, GLU71A, GLU82A, GLU82B, GLY77A, GLY77B, GLY83A, GLY83B, HIS209A, HIS209B, ILE211A, ILE92A, ILE92B, LEU184A, LEU184B, LEU188A, LEU188B, LEU194A, LEU194B, LEU203A, LEU203B, LEU74A, LEU74B, LEU75A, LEU75B, LEU78A, LEU78B, LEU85A, LEU85B, LEU96A, LEU96B, LYS186A, LYS186B, LYS199A, LYS199B, MET198A, MET206A, MET206B, MET76A, MET76B, PHE201A, PHE201B, PHE202A, PHE202B, PHE204A, PHE204B, PHE87A, PHE87B, PRO210A, SER86A, SER86B, SER93B, THR208A, THR208B, TRP88A, TRP88B, TYR84A, TYR84B, VAL180A, VAL180B, VAL189A, VAL189B, VAL264A, VAL264B, VAL73A, VAL73B
• A-C: ALA117A, ALA212C, ALA214C, ALA280C, ARG118A, ARG120A, ARG126A, ARG195C, ARG277C, ARG340A, ARG79C, ARG81C, ASN158A, ASN169A, ASN200C, ASN267C, ASP114A, ASP115A, ASP122A, ASP161A, ASP213C, ASP278C, ASP342A, ASP80C, ASP90A, GLU125A, GLU152A, GLU166A, GLU218C, GLU266C, GLU273C, GLU275C, GLU329A, GLU82C, GLY165A, GLY77C, GLY83C, ILE112A, ILE128A, ILE156A, ILE160A, ILE211C, ILE281C, LEU113A, LEU123A, LEU127A, LEU154A, LEU162A, LEU170A, LEU269C, LEU272C, LEU78C, LEU85C, LYS119A, LYS172A, LYS217C, LYS221C, LYS276C, LYS279C, MET341A, MET343A, PHE121A, PHE201C, PHE202C, PHE87A, PHE87C, PRO153A, PRO210C, SER116A, SER124A, SER155A, SER157A, SER164A, SER215C, SER86C, THR167A, THR270C, THR271C, TRP159A, TRP168A, TRP88C, TYR274C, TYR84C, TYR94A, VAL337A
• A-D: ALA212A, ALA214A, ALA214D, ALA219A, ALA219D, ALA262A, ALA262D, ALA284A, ARG222A, ARG222D, ARG277A, ARG277D, ARG79A, ARG79D, ARG81A, ARG81D, ASN263A, ASN263D, ASN267A, ASN267D, ASN89A, ASN89D, ASP213A, ASP213D, ASP278A, ASP278D, ASP342A, ASP342D, ASP80A, ASP80D, ASP90D, CYS216A, CYS216D, CYS257A, GLU218A, GLU218D, GLU266A, GLU266D, GLU273A, GLU273D, GLU275A, GLU275D, GLU285A, GLU285D, GLU82A, GLU82D, GLY261A, GLY261D, GLY83A, GLY83D, ILE211A, ILE211D, ILE256A, ILE281A, ILE281D, LEU225A, LEU225D, LEU265A, LEU265D, LEU269A, LEU269D, LEU272A, LEU272D, LEU344D, LEU78A, LEU78D, LEU85A, LEU85D, LYS199A, LYS199D, LYS217A, LYS217D, LYS221A, LYS221D, LYS276A, LYS276D, MET288A, MET341A, MET341D, MET343A, MET343D, MET76A, MET76D, PHE201A, PHE201D, PHE202A, PHE202D, PHE338A, PHE87A, PHE87D, SER215A, SER215D, SER259A, SER259D, SER282A, SER339A, SER86A, SER86D, SER91A, SER91D, THR270A, THR270D, THR271A, THR271D, TRP88A, TRP88D, TYR260A, TYR260D, TYR274A, TYR274D, TYR84A, TYR84D, VAL224D, VAL229A, VAL229D, VAL264A, VAL264D, VAL268A, VAL268D
• B-D: ALA117D, ALA214B, ARG118D, ARG120D, ARG126D, ARG222B, ARG277B, ARG340D, ARG79B, ARG81B, ASN158D, ASN169D, ASN267B, ASP114D, ASP115D, ASP122D, ASP161D, ASP278B, ASP342D, ASP80B, ASP90D, GLN176D, GLU125D, GLU152D, GLU166D, GLU218B, GLU266B, GLU273B, GLU275B, GLU329D, GLU82B, GLY165D, GLY83B, ILE112D, ILE128D, ILE156D, ILE160D, ILE173D, ILE211B, ILE281B, LEU113D, LEU123D, LEU127D, LEU154D, LEU162D, LEU170D, LEU171D, LEU269B, LEU272B, LEU344D, LEU85B, LYS119D, LYS217B, LYS276B, LYS279B, MET341D, MET343D, PHE121D, PHE201B, PHE202B, PHE87B, PHE87D, PRO153D, SER116D, SER124D, SER155D, SER157D, SER164D, SER215B, SER86B, THR167D, THR208B, THR270B, THR271B, TRP168D, TYR274B, TYR84B, TYR94D, VAL337D
• C-D: ALA185C, ALA185D, ALA207C, ALA207D, ALA262C, ARG181C, ARG181D, ARG183C, ARG183D, ARG195C, ARG195D, ARG79C, ARG79D, ASN200C, ASN200D, ASN267C, ASN267D, ASN89C, ASN89D, ASP205C, ASP205D, GLN179C, GLN179D, GLU182C, GLU182D, GLU82D, GLY77C, GLY77D, GLY83C, GLY83D, HIS209C, HIS209D, ILE211C, ILE211D, ILE92C, ILE92D, LEU184C, LEU184D, LEU188C, LEU188D, LEU194C, LEU194D, LEU203C, LEU203D, LEU74C, LEU74D, LEU75C, LEU75D, LEU78C, LEU78D, LEU85C, LEU85D, LEU96C, LEU96D, LYS186C, LYS186D, LYS199C, LYS199D, MET198C, MET206C, MET206D, MET76C, MET76D, PHE201C, PHE201D, PHE202C, PHE202D, PHE204C, PHE204D, PHE87C, PHE87D, PRO210C, PRO210D, SER86C, SER86D, SER93C, THR208C, THR208D, TRP88C, TRP88D, TYR84C, TYR84D, VAL180C, VAL180D, VAL189C, VAL189D, VAL264C, VAL264D, VAL73C, VAL73D