2YXR

the plug domain of the secy protein stablizes the closed state of the translocation channel and maintains a membrane seal

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 97
  • Norm. En. per Res.: -3.7735
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-10.0639	-33.7904	-414.521	-458.3753	147	44	25	19194	1	21	10
A-C	-41.2728	-27.6023	-297.154	-366.0291	97	37	13	13992	2	21	19
B-C	0.0	0.0	-9.3235	-9.3235	11	0	1	435	0	1	2

Interface residues

• A-B: ALA175A, ALA176A, ALA186A, ALA226A, ALA35B, ALA37B, ALA383A, ALA41B, ALA50A, ALA58B, ARG19B, ARG20B, ARG230A, ARG372A, ARG413A, ASP44A, CYS18B, CYS228A, CYS42A, GLN180A, GLU13B, GLU16B, GLU17B, GLU190A, GLU227A, GLU232A, GLU32B, GLU416A, GLY171A, GLY177A, GLY185A, GLY188A, GLY191A, GLY31A, GLY41A, GLY43B, GLY48B, GLY49A, GLY51B, HIS55B, ILE15B, ILE174A, ILE182A, ILE217A, ILE218A, ILE233A, ILE249A, ILE332A, ILE374A, ILE39A, ILE410A, ILE43A, ILE44B, ILE49B, ILE50B, ILE53B, ILE54B, ILE55A, ILE61B, LEU11B, LEU172A, LEU187A, LEU221A, LEU23B, LEU25B, LEU27A, LEU34A, LEU34B, LEU36A, LEU377A, LEU405A, LEU418A, LEU419A, LEU42B, LEU46B, LEU47B, LYS246A, LYS26B, LYS27B, LYS30B, LYS38B, LYS62B, LYS66B, MET222A, MET229A, MET380A, MET40A, MET414A, PHE14B, PHE173A, PHE183A, PHE220A, PHE251A, PHE384A, PHE387A, PHE38A, PRO189A, PRO234A, PRO248A, PRO28B, PRO375A, PRO376A, PRO53A, PRO57B, SER179A, SER381A, SER409A, SER45B, THR181A, THR216A, THR29B, THR30A, THR378A, THR407A, THR40B, THR59B, THR69A, TRP194A, TRP22B, TYR225A, TYR33B, TYR373A, TYR37A, TYR412A, TYR415A, TYR52B, TYR60B, VAL178A, VAL184A, VAL21B, VAL223A, VAL224A, VAL231A, VAL24B, VAL252A, VAL254A, VAL328A, VAL335A, VAL35A, VAL36B, VAL379A, VAL385A, VAL39B, VAL404A, VAL408A, VAL411A, VAL56B
• A-C: ALA105A, ALA148A, ALA39C, ALA45C, ALA48A, ARG104A, ARG27C, ARG51C, ASN103A, ASP158A, ASP44A, CYS110A, CYS42A, GLN108A, GLN146A, GLU102A, GLU13A, GLU159A, GLU15A, GLU21C, GLU31C, GLU44C, GLU9A, GLY109A, GLY150A, GLY35C, GLY41A, GLY49A, HIS32C, ILE100A, ILE11A, ILE145A, ILE147A, ILE152A, ILE153A, ILE155A, ILE160A, ILE26C, ILE32A, ILE34C, ILE39A, ILE42C, ILE43A, ILE43C, ILE46C, ILE5A, ILE7A, LEU106A, LEU139A, LEU142A, LEU154A, LEU157A, LEU16A, LEU36A, LEU47C, LEU4A, LEU8A, LYS10A, LYS112A, LYS163A, LYS19A, LYS25C, LYS29C, LYS3A, MET40A, PHE149A, PHE23C, PHE40C, PHE52C, PRO101A, PRO12A, PRO17A, PRO30C, PRO6A, SER151A, SER24C, THR22C, THR37C, THR47A, THR48C, TRP29A, TYR156A, TYR164A, TYR37A, TYR46A, TYR49C, VAL143A, VAL14A, VAL161A, VAL28C, VAL33A, VAL33C, VAL35A, VAL36C, VAL38C, VAL41C, VAL45A
• B-C: ALA58B, ARG51C, GLY50C, GLY63B, ILE61B, LEU65B, LYS62B, LYS66B, THR48C, THR59B, TYR49C