2YKO

structure of the human line-1 orf1p trimer

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 125
  • Norm. En. per Res.: -3.7443
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-52.6572	-99.7314	-253.997	-406.3855	125	9	12	11253	8	67	78
A-C	-58.9816	-130.9297	-278.129	-468.0404	125	10	11	11758	15	63	73
B-C	-51.1571	-90.1017	-252.747	-394.0057	116	13	13	10932	7	62	74

Interface residues

• A-B: ALA120A, ALA120B, ALA121A, ALA121B, ALA255B, ARG110A, ARG117A, ARG117B, ARG130B, ARG135A, ARG135B, ARG138A, ARG138B, ARG141A, ARG141B, ARG155A, ARG155B, ARG159B, ARG202B, ARG211B, ARG215B, ARG220A, ARG220B, ARG232A, ASN126A, ASN126B, ASN142A, ASN142B, ASN157B, ASP123A, ASP123B, ASP151A, ASP151B, ASP252B, GLN113A, GLN144A, GLN144B, GLN147A, GLN147B, GLN196B, GLN198A, GLN198B, GLN201B, GLU115A, GLU115B, GLU116A, GLU116B, GLU122A, GLU122B, GLU124A, GLU124B, GLU127A, GLU127B, GLU131A, GLU131B, GLU136A, GLU136B, GLU143A, GLU143B, GLU148A, GLU148B, GLU175B, GLU199B, GLU225A, GLU228A, GLU256B, GLU293A, GLY132A, GLY132B, ILE125A, ILE125B, ILE128A, ILE128B, ILE139A, ILE139B, ILE149A, ILE149B, ILE197B, ILE200B, ILE218B, LEU114A, LEU114B, LEU146A, LEU146B, LEU174B, LYS129A, LYS129B, LYS133B, LYS137A, LYS137B, LYS140A, LYS140B, LYS154B, LYS173B, LYS223A, LYS227A, LYS229A, LYS285A, PHE134A, PHE134B, PHE221A, PRO156A, PRO156B, SER119A, SER119B, SER145A, SER145B, SER254B, THR172B, THR203B, THR222A, THR222B, TRP150A, TRP150B, TYR152A, TYR152B, TYR282A, TYR296A, VAL118A, VAL118B, VAL153A, VAL153B, VAL195B, VAL219B, VAL224A
• A-C: ALA120A, ALA120C, ALA121A, ALA121C, ARG110A, ARG117A, ARG117C, ARG130A, ARG135A, ARG135C, ARG138A, ARG138C, ARG141A, ARG141C, ARG155A, ARG155C, ARG202A, ARG220A, ARG220C, ARG232C, ARG279C, ASN126A, ASN126C, ASN142A, ASN142C, ASN157A, ASN157C, ASN170A, ASN194A, ASP112A, ASP123A, ASP123C, ASP151A, ASP151C, ASP252A, CYS111A, GLN113A, GLN113C, GLN144A, GLN144C, GLN147A, GLN147C, GLN196A, GLN196C, GLN198A, GLN198C, GLN201A, GLU115A, GLU115C, GLU116A, GLU116C, GLU122A, GLU122C, GLU124A, GLU124C, GLU127A, GLU127C, GLU131A, GLU131C, GLU136A, GLU136C, GLU143A, GLU143C, GLU148A, GLU148C, GLU175A, GLU199A, GLU225C, GLU228C, GLU256A, GLY132A, GLY132C, GLY171A, ILE125A, ILE125C, ILE128A, ILE128C, ILE139A, ILE139C, ILE149A, ILE149C, ILE197A, ILE200A, ILE218A, LEU114A, LEU114C, LEU146A, LEU146C, LYS129A, LYS129C, LYS133A, LYS137A, LYS137C, LYS140A, LYS140C, LYS154A, LYS154C, LYS173A, LYS223A, LYS223C, LYS227C, LYS229C, PHE134A, PHE134C, PHE221C, PRO156A, PRO156C, SER119A, SER145A, SER145C, SER254A, THR172A, THR203A, THR222A, THR222C, TRP150A, TRP150C, TYR152A, TYR152C, VAL118A, VAL118C, VAL153A, VAL153C, VAL195A, VAL224C
• B-C: ALA120B, ALA120C, ALA121B, ALA121C, ALA255C, ARG117B, ARG117C, ARG130C, ARG135B, ARG135C, ARG138B, ARG138C, ARG141B, ARG141C, ARG155B, ARG159C, ARG202C, ARG215C, ARG220B, ARG220C, ASN126B, ASN126C, ASN142B, ASN142C, ASN157C, ASN170C, ASP123B, ASP123C, ASP151B, ASP151C, ASP252C, GLN144B, GLN144C, GLN147B, GLN147C, GLN196B, GLN198B, GLN198C, GLN201C, GLU115B, GLU115C, GLU116B, GLU116C, GLU122B, GLU122C, GLU124B, GLU124C, GLU127B, GLU127C, GLU131B, GLU131C, GLU136B, GLU136C, GLU143B, GLU143C, GLU148B, GLU175C, GLU199C, GLU225B, GLU228B, GLU256C, GLY132B, GLY132C, GLY171C, ILE125B, ILE125C, ILE128B, ILE128C, ILE139B, ILE139C, ILE149B, ILE149C, ILE197C, ILE200C, ILE218C, LEU114B, LEU114C, LEU146B, LEU146C, LYS129B, LYS129C, LYS133C, LYS137B, LYS137C, LYS140B, LYS140C, LYS154C, LYS173C, LYS223B, LYS285B, PHE134B, PHE134C, PHE221B, PRO156B, PRO156C, PRO283C, SER119B, SER119C, SER145B, SER145C, SER254C, THR172C, THR203C, THR222B, THR222C, TRP150B, TRP150C, TYR152B, TYR152C, TYR282B, TYR282C, VAL118B, VAL118C, VAL153B, VAL153C, VAL224B