2YHF

1.9 angstrom crystal structure of clec5a

• Total interactions analyzed: 36
• Total true interactions: 19
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 56
  • Norm. En. per Res.: -3.9894
• Hub Node: A(8)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-38.4224	-40.2944	-144.688	-223.4047	56	5	0	5255	4	18	14
A-C	-30.3239	-33.0553	-139.844	-203.2233	57	3	0	5154	4	21	14
A-D	-7.5294	-1.6717	-11.951	-21.1521	24	1	0	735	1	9	6
A-E	-11.4784	-5.8333	-13.5474	-30.8591	19	1	0	681	1	5	6
A-F	-25.7557	-18.0415	-192.648	-236.4452	75	7	0	7752	4	38	43
A-G	0.0	0.0	-0.8193	-0.8193	17	0	0	212	0	1	3
A-H	-69.2798	-15.4847	-77.8719	-162.6365	44	10	1	3183	1	21	21
A-I	-3.5535	-3.0424	-17.635	-24.2309	19	1	0	1171	0	7	5
B-D	-50.2464	-34.6854	-194.497	-279.4288	77	11	0	7824	8	38	42
B-G	0.0	0.0	-0.2544	-0.2544	2	0	0	41	0	0	0
B-H	0.0	0.0	-1.6935	-1.6935	19	0	0	250	0	1	3
B-I	0.0	0.0	-0.0301	-0.0301	5	0	0	10	0	0	1
C-F	-19.2758	-5.9096	-14.0039	-39.1893	25	3	0	800	1	9	7
C-G	-51.8755	-14.5673	-79.6992	-146.142	44	6	1	3156	2	21	22
C-I	0.0	0.0	-3.5662	-3.5662	13	0	0	345	0	2	3
D-I	-23.9796	-13.0966	-83.6442	-120.7204	44	6	0	3441	1	29	20
E-F	-29.9075	-38.266	-144.613	-212.7865	57	5	0	5331	4	18	14
E-G	0.0	0.0	-1.1373	-1.1373	15	0	0	232	0	2	3
E-H	0.0	-10.8711	-2.3546	-13.2256	7	0	0	242	0	6	5

Interface residues

• A-B: ALA187A, ALA80A, ARG139B, ARG141B, ARG81B, ASN110B, ASN144B, ASN145B, ASN149B, ASN151B, ASP120A, ASP123A, ASP74A, CYS71A, CYS82A, GLN119A, GLN119B, GLN155B, GLN79A, GLU113B, GLU136B, GLU137B, GLU76A, GLY150B, ILE108B, ILE121A, ILE164B, LEU115B, LEU118A, LEU85A, LYS114B, LYS116A, LYS116B, LYS138B, LYS73A, MET70A, PHE117A, PHE148B, PHE170B, PHE77A, PHE83A, PHE84A, PRO112B, PRO72A, SER146B, THR111B, THR122A, TRP140B, TRP142B, TRP75A, TYR127A, TYR133B, TYR78A, VAL109B, VAL147B, VAL152B
• A-C: ALA187C, ALA80C, ARG139A, ARG141A, ARG81A, ASN110A, ASN144A, ASN145A, ASN149A, ASN151A, ASP120C, ASP123C, ASP74C, CYS71C, CYS82C, GLN119A, GLN119C, GLN155A, GLN79C, GLU113A, GLU136A, GLU137A, GLU76C, GLY150A, ILE108A, ILE121C, ILE129A, ILE164A, LEU115A, LEU118C, LEU85C, LYS114A, LYS116A, LYS116C, LYS138A, LYS73C, MET70C, PHE117C, PHE148A, PHE170A, PHE77C, PHE83C, PHE84C, PRO112A, PRO72C, SER146A, THR111A, THR122C, TRP140A, TRP142A, TRP75C, TYR127C, TYR133A, TYR78C, VAL109A, VAL147A, VAL152A
• A-D: ALA124A, ARG96D, ASP120A, ASP123A, ASP97D, CYS99D, GLN119A, GLY101D, GLY103D, GLY165A, ILE121A, ILE143D, LEU115A, LEU118A, LEU166A, LYS100D, LYS102D, LYS116A, LYS168A, PHE98D, SER104D, THR105D, THR122A, THR167A
• A-E: ALA124E, ARG96A, ASP120E, ASP97A, CYS99A, GLN119E, GLY101A, GLY103A, ILE121E, LEU166E, LYS100A, LYS102A, LYS116E, LYS168E, PHE98A, SER104A, THR105A, THR122E, THR167E
• A-F: ALA162A, ALA162F, ARG135A, ARG135F, ARG139A, ARG139F, ARG141A, ARG141F, ARG96A, ARG96F, ASN144A, ASN144F, ASN145A, ASN145F, ASN156A, ASN156F, ASN158A, ASN158F, ASN160A, ASN160F, ASN93A, ASN93F, ASP176A, ASP176F, ASP97A, ASP97F, CYS161A, CYS161F, CYS175A, CYS175F, GLN157A, GLN157F, GLU136A, GLU136F, GLU137A, GLU137F, GLU94A, GLU94F, GLY130A, GLY130F, HIS134A, HIS134F, ILE132A, ILE132F, ILE143A, ILE143F, ILE177A, ILE177F, LEU106A, LEU106F, LEU131A, LEU131F, LYS100A, LYS100F, LYS138A, LYS138F, PHE128F, PHE159A, PHE159F, SER174A, SER174F, SER90A, SER90F, SER91A, SER91F, SER95A, SER95F, THR105A, THR105F, TRP142A, TRP142F, TRP92A, TRP92F, TYR133A, TYR133F
• A-G: ALA80A, ARG81A, ASN110A, ASN144A, ASN145A, ASN151G, ASN154G, ASN186A, GLN155G, GLN79A, LYS114A, LYS116G, LYS168G, SER146A, THR153G, THR169G, VAL147A
• A-H: ALA124H, ARG180A, ARG180H, ARG181A, ASP120H, ASP123H, ASP74A, ASP74H, ASP97A, CYS99A, GLN119H, GLU125H, GLU76H, GLU89A, GLU94A, GLY101A, GLY103A, GLY165H, ILE121H, LEU118H, LEU166H, LEU85A, LEU85H, LYS100A, LYS102A, LYS116H, LYS168H, LYS185A, LYS73A, PHE117H, PHE84A, PHE98A, PRO72A, SER86A, SER88A, SER90A, SER95A, THR122H, THR153H, THR167H, THR169H, THR87A, TRP75A, TYR127H
• A-I: ASN151A, ASP74I, CYS71I, GLN119A, GLU113A, GLU76I, GLY150A, ILE164A, LEU115A, LYS116A, LYS168A, LYS73I, MET70I, PHE170A, PRO112A, PRO72I, THR153A, THR167A, THR169A
• B-D: ALA162D, ALA173B, ARG135B, ARG135D, ARG139B, ARG139D, ARG141B, ARG141D, ARG96B, ARG96D, ASN144B, ASN144D, ASN145B, ASN145D, ASN156B, ASN156D, ASN158B, ASN158D, ASN160B, ASN160D, ASN93B, ASN93D, ASP176B, ASP176D, ASP97B, ASP97D, CYS161B, CYS161D, CYS175B, CYS175D, GLN157B, GLN157D, GLU136B, GLU136D, GLU137B, GLU137D, GLU94B, GLU94D, GLY130B, GLY130D, HIS134B, HIS134D, ILE132B, ILE132D, ILE143B, ILE143D, ILE177B, ILE177D, LEU106B, LEU106D, LEU131B, LEU131D, LYS100B, LYS100D, LYS138B, LYS138D, PHE128D, PHE159B, PHE159D, PHE98B, SER174B, SER174D, SER178B, SER90B, SER90D, SER91B, SER91D, SER95B, SER95D, THR105B, TRP140D, TRP142B, TRP142D, TRP92B, TRP92D, TYR133B, TYR133D
• B-G: GLN157G, LYS168B
• B-H: ALA187B, ALA80B, ARG81B, ASN110B, ASN144B, ASN145B, ASN151H, ASN154H, ASN186B, GLN155H, GLN79B, LYS114B, LYS116H, LYS168H, SER146B, THR111B, THR153H, THR169H, VAL152H
• B-I: CYS71I, GLN157B, LYS138B, MET70I, PHE77I
• C-F: ALA124C, ARG96F, ASP120C, ASP123C, ASP97F, CYS99F, GLN119C, GLY101F, GLY103F, GLY165C, ILE121C, ILE143F, LEU115C, LEU118C, LEU166C, LYS100F, LYS102F, LYS116C, LYS168C, PHE117C, PHE98F, SER104F, THR105F, THR122C, THR167C
• C-G: ALA124G, ARG180C, ARG180G, ARG181C, ASP120G, ASP123G, ASP74C, ASP74G, ASP97C, CYS99C, GLN119G, GLU125G, GLU76G, GLU89C, GLU94C, GLY101C, GLY103C, GLY165G, ILE121G, LEU118G, LEU166G, LEU85C, LEU85G, LYS100C, LYS102C, LYS116G, LYS168G, LYS185C, LYS73C, LYS73G, PHE117G, PHE84C, PHE98C, PRO72C, SER86C, SER88C, SER90C, THR122G, THR153G, THR167G, THR169G, THR87C, TRP75C, TYR127G
• C-I: ALA187C, ALA80C, ARG81C, ASN186C, ASP74I, ASP97I, GLY101I, GLY103I, LYS100I, LYS102I, LYS73I, MET70C, PHE98I
• D-I: ALA124I, ALA80I, ARG180D, ARG181D, ASP120I, ASP123I, ASP74D, ASP97D, CYS99D, GLN119I, GLN79I, GLU113I, GLU125I, GLU76I, GLU89D, GLU94D, GLY101D, ILE121I, LEU115I, LEU118I, LEU166I, LEU85D, LEU85I, LYS102D, LYS114I, LYS116I, LYS168I, LYS73D, MET70I, PHE117I, PHE77I, PHE84D, PHE98D, PRO112I, SER178D, SER86D, SER88D, SER90D, SER91D, SER95D, THR122I, THR87D, TRP75D, TYR78I
• E-F: ALA187E, ALA80E, ARG139F, ARG141F, ARG81F, ASN110F, ASN144F, ASN145F, ASN149F, ASN151F, ASP120E, ASP123E, ASP74E, CYS71E, CYS82E, GLN119E, GLN155F, GLN79E, GLN79F, GLU113F, GLU136F, GLU137F, GLU76E, GLY150F, ILE108F, ILE121E, LEU115F, LEU118E, LEU131F, LEU85E, LYS114F, LYS116E, LYS116F, LYS138F, LYS73E, MET70E, PHE117E, PHE148F, PHE170F, PHE77E, PHE83E, PHE84E, PRO112F, PRO72E, SER146F, THR111F, THR122E, THR87E, TRP140F, TRP142F, TRP75E, TYR127E, TYR133F, TYR78E, VAL109F, VAL147F, VAL152F
• E-G: ARG139G, ARG180E, ASN110G, ASN149G, GLU113G, GLU125E, GLU89E, ILE177E, PRO112G, SER178E, SER88E, THR111G, THR87E, TYR179E, VAL147G
• E-H: ALA124H, ARG180H, ASP123H, GLU125H, LYS116E, LYS168E, THR87H