2YGC

structure of vaccinia virus d13 scaffolding protein

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 244
  • Norm. En. per Res.: -3.2725
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-95.5463	-12.073	-690.876	-798.4953	244	28	24	26935	5	32	41
A-C	-124.6026	19.231	-654.757	-760.1286	245	25	23	26064	5	35	41
B-C	-87.4371	-1.8684	-656.561	-745.8665	237	25	25	26096	5	32	40

Interface residues

• A-B: ALA125B, ALA23B, ALA367A, ALA375B, ALA382A, ALA494B, ALA65A, ARG18A, ARG18B, ARG378B, ARG446B, ARG461A, ARG475A, ARG488A, ARG488B, ARG498B, ASN121A, ASN121B, ASN122B, ASN20A, ASN20B, ASN221A, ASN2A, ASN2B, ASN334A, ASN334B, ASN3A, ASN3B, ASN449B, ASN456A, ASN464A, ASN471A, ASN472A, ASN480A, ASN495B, ASN67A, ASN67B, ASN7A, ASN7B, ASP163B, ASP166A, ASP166B, ASP25A, ASP25B, ASP279A, ASP333A, ASP374B, ASP450B, ASP60A, CYS119B, GLN223A, GLN27A, GLN27B, GLN35A, GLN35B, GLN61A, GLU134B, GLU165A, GLU165B, GLU211B, GLU280A, GLU317A, GLU455A, GLU465A, GLU74B, GLY216A, GLY216B, GLY319A, GLY370A, GLY448B, GLY457A, GLY473A, HIS128B, HIS383A, HIS68B, ILE10A, ILE10B, ILE124B, ILE158B, ILE16A, ILE16B, ILE215A, ILE215B, ILE224A, ILE28A, ILE28B, ILE332A, ILE368A, ILE37A, ILE37B, ILE380B, ILE459A, ILE462A, ILE485A, ILE492A, ILE492B, ILE5A, ILE5B, ILE63A, ILE6A, ILE6B, LEU126B, LEU135B, LEU142B, LEU171A, LEU212B, LEU255A, LEU31A, LEU31B, LEU39B, LEU443A, LEU452A, LEU452B, LEU466A, LEU467A, LEU477A, LEU503B, LEU532A, LEU66A, LEU69B, LEU71B, LEU9A, LEU9B, LYS127B, LYS159B, LYS172A, LYS17B, LYS220A, LYS225A, LYS281A, LYS331A, LYS377B, LYS436A, LYS469A, LYS484A, LYS500B, LYS534A, PHE168A, PHE168B, PHE214B, PHE228A, PHE22A, PHE22B, PHE447B, PHE479A, PHE479B, PHE481A, PHE481B, PHE486A, PHE486B, PHE487A, PHE487B, PRO226A, PRO29A, PRO29B, PRO34A, PRO34B, PRO458A, PRO483A, PRO483B, PRO489A, SER129B, SER132B, SER133B, SER15B, SER169A, SER170A, SER170B, SER19A, SER19B, SER213B, SER227A, SER254A, SER26A, SER26B, SER366A, SER373B, SER385A, SER38B, SER454A, SER454B, SER460A, SER470A, SER72B, SER8A, SER8B, THR123B, THR153B, THR167A, THR167B, THR253A, THR30A, THR30B, THR369A, THR371A, THR371B, THR376B, THR468A, THR474A, THR476A, THR478A, THR482A, THR482B, THR490A, THR490B, THR491A, THR491B, THR493A, THR493B, THR4A, THR4B, THR64A, TYR155B, TYR157B, TYR217A, TYR217B, TYR276B, TYR329A, TYR32A, TYR32B, TYR36B, TYR372B, TYR453A, TYR453B, TYR463A, TYR537A, TYR62A, TYR92B, VAL154B, VAL156B, VAL164B, VAL219A, VAL21A, VAL21B, VAL222A, VAL24B, VAL330A, VAL335A, VAL341A, VAL445B, VAL451A, VAL451B, VAL496B, VAL70B
• A-C: ALA125A, ALA23A, ALA367C, ALA375A, ALA382C, ALA494A, ALA65C, ARG18A, ARG18C, ARG378A, ARG446A, ARG461C, ARG475C, ARG488A, ARG488C, ARG498A, ASN121A, ASN121C, ASN122A, ASN20A, ASN20C, ASN221C, ASN2A, ASN2C, ASN334A, ASN334C, ASN389C, ASN3A, ASN3C, ASN449A, ASN456C, ASN464C, ASN471C, ASN472C, ASN480C, ASN495A, ASN67A, ASN67C, ASN7A, ASN7C, ASP163A, ASP166A, ASP166C, ASP25A, ASP25C, ASP279C, ASP327C, ASP333C, ASP374A, ASP450A, ASP60C, CYS119A, GLN223C, GLN27A, GLN27C, GLN35A, GLN35C, GLN61C, GLU134A, GLU165A, GLU165C, GLU211A, GLU280C, GLU317C, GLU455C, GLU465C, GLU74A, GLY216A, GLY216C, GLY319C, GLY370C, GLY448A, GLY457C, GLY473C, HIS128A, HIS383C, HIS68A, ILE10A, ILE124A, ILE140A, ILE158A, ILE16A, ILE16C, ILE215A, ILE215C, ILE224C, ILE284C, ILE28A, ILE28C, ILE332C, ILE368C, ILE37A, ILE37C, ILE380A, ILE459C, ILE462C, ILE485C, ILE492A, ILE492C, ILE5A, ILE5C, ILE63C, ILE6A, ILE6C, LEU126A, LEU135A, LEU142A, LEU171C, LEU212A, LEU255C, LEU31A, LEU31C, LEU39A, LEU443C, LEU452A, LEU452C, LEU466C, LEU467C, LEU477C, LEU503A, LEU66C, LEU69A, LEU71A, LEU9A, LEU9C, LYS127A, LYS159A, LYS172C, LYS17A, LYS220C, LYS225C, LYS281C, LYS331C, LYS377A, LYS436C, LYS469C, LYS484C, LYS500A, LYS534C, PHE168A, PHE168C, PHE214A, PHE228C, PHE22A, PHE22C, PHE447A, PHE479A, PHE479C, PHE481A, PHE481C, PHE486A, PHE486C, PHE487A, PHE487C, PRO226C, PRO29A, PRO29C, PRO34A, PRO34C, PRO458C, PRO483A, PRO483C, PRO489C, SER129A, SER132A, SER133A, SER15A, SER169C, SER170A, SER170C, SER19A, SER19C, SER213A, SER227C, SER254C, SER26A, SER26C, SER366C, SER373A, SER385C, SER38A, SER454C, SER460C, SER470C, SER72A, SER8A, SER8C, THR123A, THR153A, THR167A, THR167C, THR253C, THR30A, THR30C, THR369C, THR371A, THR371C, THR376A, THR468C, THR474C, THR476C, THR478C, THR482A, THR482C, THR490A, THR490C, THR491A, THR491C, THR493A, THR493C, THR4C, THR64C, TYR155A, TYR157A, TYR217A, TYR217C, TYR276A, TYR329C, TYR32A, TYR32C, TYR36A, TYR36C, TYR372A, TYR453A, TYR453C, TYR463C, TYR537C, TYR62C, TYR92A, VAL154A, VAL156A, VAL164A, VAL219C, VAL21A, VAL21C, VAL222C, VAL24A, VAL330C, VAL335C, VAL341C, VAL445A, VAL451A, VAL451C, VAL496A, VAL70A
• B-C: ALA125C, ALA23C, ALA367B, ALA375C, ALA382B, ALA494C, ALA65B, ARG18B, ARG18C, ARG378C, ARG446C, ARG461B, ARG475B, ARG488B, ARG488C, ARG498C, ASN121B, ASN121C, ASN122C, ASN20B, ASN20C, ASN221B, ASN2B, ASN2C, ASN334B, ASN334C, ASN3B, ASN3C, ASN449C, ASN456B, ASN464B, ASN471B, ASN472B, ASN480B, ASN495C, ASN67B, ASN67C, ASN7B, ASN7C, ASP163C, ASP166B, ASP166C, ASP25C, ASP279B, ASP333B, ASP374C, ASP450C, ASP60B, CYS119C, GLN223B, GLN27B, GLN27C, GLN35B, GLN35C, GLN61B, GLU134C, GLU165B, GLU165C, GLU211C, GLU280B, GLU317B, GLU455B, GLU465B, GLY216B, GLY216C, GLY319B, GLY370B, GLY448C, GLY457B, GLY473B, HIS128C, HIS383B, HIS68C, ILE10C, ILE124C, ILE158C, ILE16B, ILE16C, ILE215B, ILE215C, ILE224B, ILE28B, ILE28C, ILE332B, ILE368B, ILE37B, ILE37C, ILE380C, ILE459B, ILE462B, ILE485B, ILE492B, ILE492C, ILE5B, ILE5C, ILE63B, ILE6B, ILE6C, LEU126C, LEU135C, LEU142C, LEU171B, LEU212C, LEU255B, LEU31B, LEU31C, LEU39C, LEU443B, LEU452B, LEU452C, LEU466B, LEU467B, LEU477B, LEU503C, LEU66B, LEU69C, LEU71C, LEU9B, LEU9C, LYS127C, LYS159C, LYS172B, LYS17C, LYS220B, LYS225B, LYS281B, LYS331B, LYS377C, LYS436B, LYS469B, LYS484B, LYS500C, LYS534B, PHE168B, PHE168C, PHE214C, PHE228B, PHE22B, PHE22C, PHE447C, PHE479B, PHE481B, PHE481C, PHE486B, PHE486C, PHE487B, PHE487C, PRO226B, PRO29B, PRO29C, PRO34B, PRO34C, PRO458B, PRO483B, PRO483C, PRO489B, SER129C, SER132C, SER133C, SER15C, SER169B, SER170B, SER170C, SER19B, SER19C, SER213C, SER227B, SER254B, SER26B, SER26C, SER366B, SER373C, SER385B, SER38C, SER454B, SER460B, SER470B, SER72C, SER8B, SER8C, THR123C, THR153C, THR167B, THR167C, THR253B, THR30B, THR30C, THR369B, THR371B, THR371C, THR376C, THR468B, THR474B, THR476B, THR478B, THR482B, THR482C, THR490B, THR490C, THR491B, THR491C, THR493B, THR493C, THR4B, THR64B, TYR155C, TYR157C, TYR217B, TYR217C, TYR276C, TYR329B, TYR32B, TYR32C, TYR36C, TYR372C, TYR453B, TYR453C, TYR463B, TYR537B, TYR62B, TYR92C, VAL154C, VAL156C, VAL164C, VAL219B, VAL21B, VAL21C, VAL222B, VAL24C, VAL330B, VAL335B, VAL341B, VAL445C, VAL451B, VAL451C, VAL496C, VAL70C