2Y9H

structure a of crispr endoribonuclease cse3 bound to 19 nt rna

• Total interactions analyzed: 120
• Total true interactions: 14
• Strongest Interaction:
  • Chains: A-I
  • Int. Res.: 36
  • Norm. En. per Res.: -4.1008
• Hub Node: A(5)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-C	0.0	0.0	-0.1763	-0.1763	2	0	0	43	0	0	0
A-E	0.0	14.6447	-4.4732	10.1715	21	5	0	515	0	4	5
A-G	-19.233	-12.9767	-154.085	-186.2946	84	14	3	6848	7	50	57
A-I	-22.4955	-63.4487	-61.6857	-147.6299	36	7	0	2452	6	18	23
A-O	0.0	0.0	-6.6412	-6.6412	21	0	0	534	0	13	10
C-E	-28.9749	37.1095	-148.868	-140.7334	78	14	3	6326	5	44	49
C-G	0.0	0.7098	-0.5987	0.1112	10	0	0	121	0	5	5
C-M	0.0	-28.4835	-24.5822	-53.0657	16	3	0	772	1	11	11
E-G	0.0	0.0	-0.0465	-0.0465	2	0	0	7	0	7	2
E-K	-21.501	10.4909	-59.2476	-70.2577	37	10	0	2445	4	18	27
I-K	-2.5072	0.0	-7.0819	-9.5891	12	0	0	328	0	2	3
I-O	0.0	0.0	-6.152	-6.152	13	0	0	369	0	11	9
K-M	0.0	0.0	-20.3755	-20.3755	21	3	3	1170	0	4	1
K-O	0.0	0.0	-13.4333	-13.4333	29	0	0	773	0	14	11

Interface residues

• A-C: ARG142C, LEU54A
• A-E: ALA108E, ALA109E, ARG106E, ARG179A, ARG52A, ARG96A, ARG98A, GLU177A, GLU55A, GLY111E, GLY162E, GLY166E, LEU107E, LEU54A, LYS112E, LYS159E, LYS167E, LYS5A, PRO211A, THR110E, VAL58A
• A-G: ALA11A, ALA120G, ALA124G, ALA14A, ALA15A, ALA165A, ALA190G, ALA20A, ALA51A, ARG100A, ARG128G, ARG129G, ARG136G, ARG13A, ARG142G, ARG157A, ARG158A, ARG16A, ARG17A, ARG187G, ARG194G, ASN21A, ASN9A, ASP161A, ASP184G, ASP18A, GLN147G, GLN170A, GLU121G, GLU127G, GLU131G, GLU132G, GLU139G, GLU141G, GLU155A, GLU163A, GLU164A, GLU186G, GLU24A, GLU55A, GLY133G, GLY134G, GLY140G, GLY143G, GLY162A, GLY166A, GLY195G, GLY197G, GLY53A, ILE148G, LEU130G, LEU137G, LEU138G, LEU154A, LEU168A, LEU169A, LEU19A, LEU54A, LYS117G, LYS122G, LYS159A, LYS160A, LYS167A, LYS200G, PHE135G, PHE153A, PRO10A, PRO119G, PRO144G, PRO185G, PRO22A, PRO56A, PRO57A, PRO91G, SER12A, THR118G, THR152A, THR191G, TRP145G, VAL123G, VAL146G, VAL156A, VAL183G, VAL196G
• A-I: ALA14I, ALA15I, ALA36A, ARG13I, ARG16I, ARG17I, ARG27A, ARG27I, ARG35A, ARG41A, ASN21I, ASP18I, ASP68A, ASP73I, GLU24I, GLU38A, GLU39A, GLY40A, HIS26I, LEU29I, LEU37A, LEU72I, LYS31A, LYS31I, MET25I, PRO22I, SER30A, SER30I, SER34A, THR28A, THR28I, TYR23A, TYR23I, TYR76I, VAL33A, VAL71I
• A-O: ALA0A, ARG136O, ARG41A, ARG94O, GLN93O, GLU181O, GLU66A, GLY-1A, GLY92O, HIS86A, LEU137O, LYS83A, LYS90O, MET1A, PHE85A, PRO185O, PRO84A, PRO91O, TRP2A, VAL182O, VAL183O
• C-E: ALA11E, ALA120C, ALA124C, ALA14E, ALA15E, ALA165E, ALA190C, ALA20E, ALA51E, ARG100E, ARG128C, ARG129C, ARG136C, ARG13E, ARG142C, ARG157E, ARG158E, ARG16E, ARG17E, ARG187C, ARG194C, ASN21E, ASP184C, ASP18E, GLN147C, GLN170E, GLU121C, GLU127C, GLU131C, GLU132C, GLU139C, GLU141C, GLU155E, GLU163E, GLU164E, GLU186C, GLU24E, GLY133C, GLY134C, GLY140C, GLY143C, GLY162E, GLY166E, GLY195C, GLY197C, GLY53E, ILE148C, LEU130C, LEU137C, LEU138C, LEU154E, LEU168E, LEU169E, LEU19E, LEU54E, LYS117C, LYS122C, LYS159E, LYS167E, PHE135C, PHE153E, PHE176C, PRO10E, PRO119C, PRO144C, PRO185C, PRO57E, PRO91C, SER12E, THR118C, THR152E, THR191C, TRP125C, TRP145C, VAL123C, VAL146C, VAL183C, VAL196C
• C-G: ALA88G, ARG142C, ARG35G, ARG41G, ASP151C, GLU186G, GLU39G, HIS86G, PHE153C, THR152C
• C-M: ALA11M, ALA15M, ALA165C, ALA20M, ARG13M, ARG16M, ASN9M, ASP161C, GLU163C, GLU164C, GLY162C, GLY166C, LEU19M, LYS160C, PRO10M, SER12M
• E-G: GLU186G, GLY162E
• E-K: ALA14K, ALA15K, ALA36E, ARG13K, ARG16K, ARG17K, ARG27E, ARG27K, ARG35E, ARG41E, ASN21K, ASP18K, ASP68E, ASP73K, GLU24K, GLU38E, GLU39E, GLY40E, HIS26K, LEU29K, LEU37E, LEU72K, LYS31E, LYS31K, MET25K, PRO22K, SER30E, SER30K, SER34E, THR28E, THR28K, TYR23E, TYR23K, TYR76K, VAL33E, VAL71E, VAL71K
• I-K: ALA108I, ALA109I, ARG179K, ARG96K, ARG98K, GLU177K, GLY111I, LEU107I, LYS112I, LYS5K, PRO211K, THR110I
• I-O: ALA210O, ARG179O, ARG35I, ARG96O, ARG98O, GLN147O, GLU177O, GLU38I, GLU39I, GLY178O, LEU95O, PHE97O, PRO211O
• K-M: ALA108M, ALA109M, ALA51K, ARG100K, ARG98K, ASP151K, GLN147K, GLN150K, GLU177K, GLU49K, GLU55K, GLY111M, ILE148K, LEU107M, LEU149K, LEU175K, LYS105M, LYS112M, PRO50K, THR110M, THR152K
• K-O: ALA0K, ALA0O, ARG35K, ARG41O, ASP68K, ASP68O, GLU66K, GLU66O, HIS86K, HIS86O, LEU64O, LYS83K, LYS83O, MET1O, PHE85K, PHE85O, PRO67K, PRO67O, PRO81K, PRO81O, PRO82K, PRO82O, PRO84K, PRO84O, SER70K, THR65O, TRP2K, TRP2O, TRP69K