2Y5B

structure of usp21 in complex with linear diubiquitin-aldehyde

• Total interactions analyzed: 6
• Total true interactions: 4
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 164
  • Norm. En. per Res.: -4.5376
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-135.8242	-111.9981	-496.349	-744.1713	164	26	11	19491	5	52	66
A-E	-5.8155	0.0	-13.6148	-19.4303	20	1	0	756	0	2	2
A-F	-5.1178	-4.6915	-61.5926	-71.402	46	4	0	2784	3	20	22
E-F	-165.3407	-83.6341	-566.83	-815.8049	194	40	11	22929	4	62	84

Interface residues

• A-B: ALA122B, ALA302A, ALA434A, ALA468A, ARG118B, ARG148B, ARG150B, ARG312A, ARG390A, ARG439A, ARG441A, ARG465A, ARG470A, ASN216A, ASN219A, ASN421A, ASN433A, ASN464A, ASN509A, ASP301A, ASP399A, ASP438A, CYS221A, CYS381A, CYS398A, CYS419A, CYS437A, CYS508A, GLN107B, GLN116B, GLN117B, GLN125B, GLN138B, GLN299A, GLN300A, GLN303A, GLN377A, GLN78B, GLU110B, GLU127B, GLU140B, GLU304A, GLU311A, GLU366A, GLU395A, GLU426A, GLU427A, GLU428A, GLU430A, GLU432A, GLU549A, GLU92B, GLY111B, GLY123B, GLY151B, GLY376A, GLY471A, GLY512A, GLY517A, GLY550A, GLY86B, HIS144B, HIS314A, HIS462A, HIS510A, HIS515A, HIS518A, HIS76B, ILE112B, ILE120B, ILE137B, ILE404A, ILE473A, ILE79B, ILE89B, LEU119B, LEU126B, LEU143B, LEU145B, LEU147B, LEU149B, LEU223A, LEU306A, LEU308A, LEU315A, LEU378A, LEU382A, LEU400A, LEU402A, LEU422A, LEU429A, LEU450A, LEU463A, LEU71B, LEU73B, LEU84B, LEU91B, LYS109B, LYS124B, LYS139B, LYS307A, LYS406A, LYS425A, LYS443A, LYS448A, LYS449A, LYS474A, LYS475A, LYS82B, LYS87B, MET310A, PHE121B, PHE222A, PHE294A, PHE305A, PHE394A, PHE397A, PHE420A, PHE423A, PHE466A, PHE80B, PRO113B, PRO292A, PRO403A, PRO405A, PRO435A, SER141B, SER293A, SER298A, SER380A, SER391A, SER401A, SER446A, SER467A, SER469A, SER472A, SER476A, SER477A, SER511A, SER513A, THR142B, THR220A, THR392A, THR393A, THR424A, THR83B, THR85B, THR88B, THR90B, TYR135B, TYR290A, TYR362A, TYR389A, TYR516A, TYR519A, TYR551A, VAL146B, VAL291A, VAL375A, VAL396A, VAL436A, VAL514A, VAL552A, VAL81B
• A-E: ARG486A, ARG524A, ASN543A, GLN288E, GLN300E, GLN485A, GLN503A, GLN544A, GLU542A, GLY296E, LEU484A, LYS289E, PHE294E, PRO292E, SER293E, SER295E, SER298E, SER541A, TYR297E, VAL291E
• A-F: ALA104F, ARG130F, ARG150F, ARG417A, ARG486A, ASN101F, ASN421A, ASN543A, ASP115F, ASP128F, ASP134F, ASP418A, ASP481A, ASP491A, ASP495A, ASP97F, GLN107F, GLN485A, GLU100F, GLU127F, GLU94F, GLY129F, GLY490A, ILE99F, LEU126F, LEU487A, LEU489A, LYS103F, LYS105F, LYS413A, PHE492A, PRO113F, PRO114F, PRO483A, PRO500A, SER133F, SER415A, SER488A, SER499A, SER96F, THR131F, THR98F, TYR135F, TYR502A, VAL102F, VAL501A
• E-F: ALA122F, ALA302E, ALA386E, ALA434E, ALA468E, ARG118F, ARG148F, ARG150F, ARG312E, ARG390E, ARG42F, ARG439E, ARG441E, ARG445E, ARG465E, ARG470E, ARG72F, ARG74F, ASN136F, ASN219E, ASN433E, ASN464E, ASN509E, ASP301E, ASP399E, ASP438E, CYS221E, CYS381E, CYS384E, CYS387E, CYS398E, CYS419E, CYS437E, CYS440E, CYS508E, GLN107F, GLN116F, GLN117F, GLN125F, GLN138F, GLN299E, GLN300E, GLN303E, GLN31F, GLN377E, GLN385E, GLN40F, GLN41F, GLN442E, GLN78F, GLU110F, GLU127F, GLU140F, GLU304E, GLU311E, GLU34F, GLU366E, GLU395E, GLU427E, GLU428E, GLU430E, GLU432E, GLU549E, GLU92F, GLY10F, GLY111F, GLY123F, GLY151F, GLY35F, GLY376E, GLY388E, GLY471E, GLY512E, GLY517E, GLY550E, GLY86F, HIS144F, HIS314E, HIS462E, HIS510E, HIS515E, HIS518E, HIS76F, ILE112F, ILE120F, ILE13F, ILE30F, ILE36F, ILE404E, ILE473E, ILE79F, ILE89F, LEU119F, LEU126F, LEU143F, LEU145F, LEU147F, LEU149F, LEU223E, LEU306E, LEU308E, LEU315E, LEU378E, LEU382E, LEU400E, LEU402E, LEU422E, LEU429E, LEU450E, LEU463E, LEU69F, LEU71F, LEU73F, LEU84F, LEU8F, LEU91F, LYS109F, LYS11F, LYS124F, LYS139F, LYS307E, LYS33F, LYS406E, LYS425E, LYS443E, LYS448E, LYS449E, LYS474E, LYS475E, LYS6F, LYS82F, LYS87F, MET310E, MET358E, MET77F, PHE121F, PHE222E, PHE294E, PHE305E, PHE394E, PHE397E, PHE423E, PHE466E, PHE80F, PRO113F, PRO292E, PRO37F, PRO403E, PRO405E, PRO435E, SER141F, SER293E, SER298E, SER380E, SER391E, SER401E, SER431E, SER446E, SER467E, SER469E, SER472E, SER476E, SER477E, SER511E, SER513E, THR12F, THR142F, THR220E, THR392E, THR393E, THR424E, THR444E, THR7F, THR83F, THR85F, THR88F, THR90F, THR9F, TYR135F, TYR362E, TYR389E, TYR516E, TYR519E, TYR551E, VAL146F, VAL291E, VAL375E, VAL396E, VAL436E, VAL514E, VAL552E, VAL5F, VAL70F, VAL81F