2Y10
the crystal structure of ef-tu and trp-trna-trp bound to a cognate codon on the 70s ribosome.
Total interactions analyzed 351
Total true interactions 28
Strongest Interaction Chains J-N
Int. Res. 58
Norm. En. per Res. -5.0485
Hub Node C(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
B-C 0.0 0.0 -0.0013 -0.0013 4 0 0 3 0 1 2
B-E 0.0 0.0 -0.2332 -0.2332 5 0 0 38 0 0 2
B-H -21.7134 -42.1454 -74.505 -138.3638 33 9 0 2812 2 17 17
C-D 0.0 0.0 -1.0012 -1.0012 8 0 0 124 0 0 7
C-E 0.0 -12.2685 -4.8469 -17.1154 13 0 0 521 0 4 5
C-J 0.0 9.6919 -73.7862 -64.0943 55 0 2 3284 0 14 26
C-N -12.9471 10.7408 -221.966 -224.1723 73 9 4 9066 0 19 38
D-E 0.0 -27.7398 -41.5261 -69.2659 46 2 0 2230 0 6 10
E-H -36.3797 -54.9385 -153.583 -244.9012 64 17 2 6563 4 40 42
F-O 0.0 0.0 -2.2055 -2.2055 5 0 0 190 0 0 2
F-R -52.199 -33.5192 -279.135 -364.8532 89 23 10 11025 4 15 25
G-I 0.0 2.2927 -44.3712 -42.0785 38 7 4 2318 0 6 7
G-K 0.0 0.0 -42.9752 -42.9752 24 5 4 2093 0 2 6
G-U 0.0 0.0 -0.0586 -0.0586 2 0 0 21 0 1 0
H-L 0.0 0.0 -9.1222 -9.1222 9 0 0 479 0 0 1
H-Q 0.0 4.0465 -30.5232 -26.4767 14 1 0 1221 0 2 8
I-J 0.0 -1.6941 -35.4328 -37.1269 19 7 0 1328 0 9 16
I-N 0.0 0.0 -14.9948 -14.9948 8 0 0 509 0 0 0
J-N -26.6376 -43.1607 -223.012 -292.8103 58 20 7 8775 5 13 34
K-R -24.0927 -14.9822 -68.8671 -107.942 31 3 2 3065 1 13 19
L-Q 0.0 0.0 -53.1009 -53.1009 22 2 4 2319 0 0 8
L-Z 0.0 -8.8291 -2.5937 -11.4228 12 0 0 197 1 10 6
M-S -9.9789 11.7965 -87.4908 -85.6732 43 11 2 4233 0 9 22
M-U 0.0 0.0 -1.7117 -1.7117 9 0 0 266 0 3 9
N-S 0.0 0.0 -0.2596 -0.2596 3 0 0 52 0 1 2
O-Q 0.0 -1.1101 -0.1514 -1.2615 10 0 0 80 0 7 6
T-Z 0.0 0.0 -0.0067 -0.0067 2 0 0 5 0 0 0
Y-Z -4.8326 0.0 -15.4066 -20.2392 33 15 0 4833 0 0 0