2XSO
crystal structure of p4 variant of biphenyl dioxygenase from burkholderia xenovorans lb400
Total interactions analyzed 276
Total true interactions 66
Strongest Interaction Chains E-G
Int. Res. 135
Norm. En. per Res. -6.0011
Hub Node D(9)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -107.2576 -108.2204 -487.573 -703.051 164 21 10 19634 4 56 60
A-E 0.0 -10.4595 -9.1065 -19.566 21 0 0 648 0 7 10
A-F -22.9809 1.174 -201.972 -223.7789 69 4 9 7190 0 22 21
A-H 0.0 -4.5749 -4.7318 -9.3068 15 0 0 426 0 7 3
B-E 0.0 17.2019 -48.1615 -30.9596 35 3 0 2137 0 31 29
B-F -20.9861 -41.8837 -111.614 -174.4838 79 5 1 4938 7 47 43
C-D -98.6522 -94.0341 -494.665 -687.3513 162 15 10 20065 5 58 59
C-E -115.3075 -168.3477 -486.831 -770.4862 136 22 7 17671 11 62 42
C-F -17.8898 7.8642 -65.2971 -75.3228 46 3 0 2548 6 14 14
C-G -151.7724 -173.0369 -474.331 -799.1403 138 23 7 17659 10 63 42
C-K 0.0 -7.8085 -9.1907 -16.9993 21 0 0 595 0 7 10
C-L 0.0 22.3747 -48.1714 -25.7967 34 0 0 2187 0 31 29
C-O -20.7741 -26.1104 -111.076 -157.9606 103 8 1 5488 3 38 36
D-F -76.9076 -88.6019 -379.3 -544.8095 135 17 11 15057 10 40 39
D-G -18.7266 4.9598 -61.232 -74.9988 45 4 0 2563 7 14 14
D-H -63.464 -121.751 -384.878 -570.093 138 16 10 15345 12 39 41
D-K -34.2919 -4.8908 -213.051 -252.2337 68 6 9 7443 2 20 20
D-L -22.449 -31.5604 -117.024 -171.0335 80 3 1 4989 8 45 43
D-M 0.0 0.0 -13.5629 -13.5629 26 0 0 654 0 3 2
D-N 0.0 -8.4701 -36.1204 -44.5904 32 0 1 2012 1 14 14
D-S -5.8998 -5.2138 -10.8295 -21.9431 18 0 0 600 0 7 4
D-U 0.0 0.0 -0.0067 -0.0067 2 0 0 3 0 2 1
E-F -108.6107 -91.8863 -481.896 -682.393 165 22 10 19821 5 55 59
E-G -149.3211 -169.6619 -491.165 -810.148 135 22 6 17714 10 63 42
E-H -16.1143 4.571 -69.2374 -80.7807 46 7 0 2608 6 14 14
F-H -75.0875 -106.821 -392.853 -574.7616 137 25 9 15244 14 38 40
F-K 0.0 -4.4873 -6.2968 -10.7841 17 0 0 501 0 7 5
G-H -111.1564 -95.0233 -490.606 -696.7857 163 20 10 19930 6 56 58
G-S 0.0 -10.5889 -12.6051 -23.194 21 0 0 727 0 8 9
G-T 0.0 14.101 -39.1515 -25.0505 33 0 0 1950 0 31 28
H-S -21.7942 4.9411 -210.315 -227.1681 71 8 9 7387 0 21 20
H-T -6.838 -34.7262 -115.833 -157.3972 79 3 1 5275 6 47 45
H-U 0.0 0.0 -11.6529 -11.6529 23 0 0 662 0 3 2
H-V -5.8524 -2.7503 10 ARG158H, ARG67V, ASP126H, ASP160H, GLU121H, GLU13V, GLU68V, GLU70V, LYS10V, LYS17H
I-J -115.7467 -111.8709 -495.571 -723.1886 169 19 10 20202 4 58 60
I-O -105.1687 -154.9945 -473.026 -733.1893 137 33 7 17937 8 63 41
I-P 0.0 0.0 -0.0004 -0.0004 2 0 0 1 0 0 0
J-O -38.7877 9.313 -76.6981 -106.1728 44 6 0 2757 6 14 14
J-P -73.4882 -90.7641 -437.784 -602.0364 132 30 9 16923 9 41 41
K-L -103.1538 -115.8076 -497.106 -716.0674 163 17 10 19910 6 56 61
K-M -123.7809 -169.1838 -505.471 -798.4357 134 18 6 18015 10 62 41
K-Q -112.8235 -174.2353 -499.059 -786.1177 136 23 7 18006 11 62 45
K-R -12.1843 -0.4679 -70.7276 -83.3797 47 10 0 2648 6 14 14
L-M -13.9483 7.2955 -74.3963 -81.0491 45 3 0 2555 6 14 14
L-N -86.458 -81.1924 -446.711 -614.3614 130 29 10 16624 12 40 40
L-R -69.7639 -123.3212 -445.374 -638.4591 133 25 10 16751 11 40 43
M-N -105.9908 -108.3665 -496.685 -711.0424 165 17 10 20234 5 58 61
M-Q -147.8845 -163.2449 -495.78 -806.9094 139 21 7 17828 10 63 42
M-R 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 0 0
N-Q -11.0175 8.1756 -69.0329 -71.8748 43 8 0 2582 5 14 14
N-R -84.8822 -94.5084 -445.834 -625.2246 133 32 9 16899 11 39 41
N-U 0.0 0.0 -5.6974 -5.6974 11 0 1 414 0 9 11
O-P -102.1935 -104.0268 -499.593 -705.8133 166 21 10 20174 6 57 59
Q-R -111.0898 -104.1752 -486.203 -701.468 164 23 10 20026 6 56 58
S-T -95.3788 -110.0584 -490.315 -695.7522 167 16 10 19879 6 56 60
S-U -95.1032 -161.9186 -493.838 -750.8598 134 19 6 17527 8 58 36
S-W -88.0242 -175.6375 32 ALA142S, ALA404W, ARG101S, ARG103S, ARG106S, ARG109S, ARG345S, ARG400W, ARG417W, ASN410W, ASP230W, ASP81S, GLN99S, GLU141S, GLU225W, GLU390W, GLU394W, GLU435W, GLU51S, GLU80S, GLY124S, GLY414W, HIS102S, HIS123S, HIS233W, LYS397W, LYS403W, LYS405W, PRO408W, SER121S, THR237W, TYR402W
S-X -32.1089 4.9468 11 ARG106S, ARG109S, ARG143X, ARG345S, ASP111S, GLU142X, GLU349S, GLU351S, LYS213S, TRP102X, TYR77S
T-U -21.8267 2.5435 -50.0817 -69.365 40 4 0 2021 0 10 10
T-V -79.8294 -84.5642 24 ARG109T, ARG111T, ARG41T, ARG61V, ARG67V, ASN105T, ASN116V, ASN131V, ASN63V, ASP175V, ASP39T, ASP99T, GLN29T, GLN36T, GLU151V, GLU72V, HIS112T, HIS40T, ILE66V, LYS10V, SER115V, SER177V, VAL114T, VAL117V
T-X -56.9004 -93.0579 18 ARG109X, ARG111X, ARG61T, ARG67T, ASN105X, ASN116T, ASN63T, ASP175T, ASP39X, ASP99X, GLU151T, GLU72T, HIS112X, HIS40X, ILE66T, LYS10T, SER115T, VAL114X
U-V -100.2263 -115.19 31 ALA380U, ARG140V, ARG143V, ARG371U, ARG372U, ARG376U, ARG64V, ARG92V, ASN63V, ASP111U, ASP387U, ASP76V, ASP78V, ASP83V, GLU104V, GLU142V, GLU368U, GLU390U, GLU394U, GLU72V, GLU84V, GLY209U, GLY381U, LEU179V, LEU184V, LEU79V, LYS213U, LYS397U, LYS95V, TRP102V, VAL215U
U-W -90.4252 -161.2183 31 ALA404U, ARG101W, ARG103W, ARG106W, ARG109W, ARG345W, ARG400U, ARG417U, ASN410U, ASP230U, ASP81W, GLN99W, GLU141W, GLU225U, GLU390U, GLU394U, GLU435U, GLU51W, GLU80W, HIS102W, HIS123W, HIS233U, LYS397U, LYS403U, LYS405U, PRO137W, THR236U, THR238U, TYR122W, TYR232U, TYR402U
V-W -9.4376 1.9318 9 ARG109W, ARG143V, ARG345W, ASP111W, GLU142V, GLU349W, GLU351W, LYS213W, TRP102V
V-X -85.8993 -84.967 20 ARG109V, ARG111V, ARG41V, ARG61X, ARG67X, ASN105V, ASN116X, ASN63X, ASP175X, ASP39V, ASP99V, GLU151X, GLU72X, HIS112V, HIS40V, ILE66X, LEU141V, LYS10X, SER177X, VAL114V
W-X -91.1937 -108.1825 40 ALA112W, ALA380W, ARG140X, ARG143X, ARG371W, ARG372W, ARG376W, ARG64X, ARG92X, ARG94X, ASN114W, ASN63X, ASP111W, ASP252W, ASP387W, ASP76X, ASP78X, ASP83X, GLU104X, GLU142X, GLU368W, GLU390W, GLU394W, GLU68X, GLU72X, GLU84X, GLY209W, GLY381W, HIS239W, HIS81X, ILE247W, LEU179X, LEU184X, LEU244W, LEU79X, LYS213W, LYS397W, LYS95X, PRO248W, VAL215W