2VQ0

capsid structure of sesbania mosaic virus coat protein deletion mutant rcp(delta 48 to 59)

• Total interactions analyzed: 3
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 95
  • Norm. En. per Res.: -3.0054
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-51.8622	30.2407	-263.896	-285.5176	95	11	2	11083	2	11	18
A-C	-51.9522	29.3071	-246.526	-269.1711	91	17	2	11018	2	11	18
B-C	-36.9527	29.7004	-170.63	-177.8824	92	21	2	10302	0	13	19

Interface residues

• A-B: ALA113B, ALA148A, ALA214B, ALA216A, ALA216B, ALA224A, ALA224B, ALA230A, ALA263B, ALA265B, ARG162A, ARG231A, ASN114B, ASN156A, ASN160A, ASN222A, ASN222B, ASN267B, ASN268B, ASP146A, ASP149A, ASP196A, ASP212B, ASP220A, ASP220B, GLN144A, GLN157A, GLN257B, GLU260B, GLY163A, GLY201A, GLY201B, GLY218A, GLY218B, GLY72B, GLY73B, ILE223A, ILE223B, ILE259B, ILE74B, LEU158A, LEU161A, LEU195A, LEU200A, LEU227A, LEU227B, LEU266B, LYS117B, LYS199A, LYS202A, LYS202B, LYS203A, LYS203B, LYS208B, MET147A, MET258B, PHE143A, PRO152A, PRO206B, PRO226A, PRO226B, PRO229A, PRO261B, SER116B, SER119B, SER154A, SER159A, SER198A, SER264B, THR150A, THR209B, THR215B, THR225A, THR225B, THR262B, TRP115B, TRP204A, TRP204B, TYR118B, TYR145A, TYR164A, TYR205A, TYR205B, TYR207B, TYR213B, VAL151A, VAL153A, VAL197A, VAL217B, VAL219A, VAL219B, VAL221A, VAL228A, VAL233A, VAL94A
• A-C: ALA148C, ALA211A, ALA214A, ALA216A, ALA216C, ALA224A, ALA224C, ALA230C, ALA263A, ALA265A, ARG162C, ARG231C, ASN114A, ASN156C, ASN160C, ASN222A, ASN222C, ASN267A, ASN268A, ASP146C, ASP149C, ASP196C, ASP212A, ASP220A, ASP220C, GLN144C, GLN157C, GLN257A, GLU260A, GLY163C, GLY201A, GLY201C, GLY218A, GLY218C, GLY73A, ILE223A, ILE223C, ILE259A, ILE74A, LEU158C, LEU161C, LEU195C, LEU200C, LEU227A, LEU227C, LEU266A, LYS117A, LYS199C, LYS202A, LYS202C, LYS203A, LYS208A, MET147C, MET258A, PHE143C, PRO152C, PRO206A, PRO226A, PRO226C, PRO229C, PRO261A, SER116A, SER119A, SER154C, SER159C, SER198C, SER264A, THR150C, THR209A, THR215A, THR225A, THR225C, THR262A, TRP115A, TRP204A, TYR145C, TYR164C, TYR205A, TYR205C, TYR207A, TYR213A, VAL151C, VAL153C, VAL197C, VAL217A, VAL219A, VAL219C, VAL221C, VAL228C, VAL233C, VAL94C
• B-C: ALA148B, ALA211C, ALA214C, ALA216B, ALA216C, ALA224B, ALA224C, ALA230B, ALA263C, ALA265C, ARG162B, ARG231B, ARG71C, ASN114C, ASN156B, ASN160B, ASN222B, ASN222C, ASN267C, ASN268C, ASP146B, ASP149B, ASP196B, ASP212C, ASP220B, ASP220C, GLN144B, GLN157B, GLN257C, GLU260C, GLY163B, GLY201B, GLY201C, GLY218B, GLY218C, GLY72C, GLY73C, ILE223B, ILE223C, ILE259C, ILE74C, LEU158B, LEU161B, LEU195B, LEU200B, LEU227B, LEU227C, LEU266C, LYS117C, LYS199B, LYS202B, LYS202C, LYS203B, LYS203C, LYS208C, MET147B, MET258C, PHE143B, PRO152B, PRO206C, PRO226B, PRO226C, PRO229B, PRO261C, SER116C, SER119C, SER154B, SER198B, SER264C, SER70C, THR150B, THR209C, THR215C, THR225B, THR225C, THR262C, TRP115C, TRP204C, TYR145B, TYR205B, TYR205C, TYR207C, TYR213C, VAL151B, VAL153B, VAL197B, VAL217C, VAL219B, VAL219C, VAL221B, VAL228B, VAL233B