2VIG

crystal structure of human short-chain acyl coa dehydrogenase

• Total interactions analyzed: 36
• Total true interactions: 16
• Strongest Interaction:
  • Chains: E-G
  • Int. Res.: 145
  • Norm. En. per Res.: -4.3839
• Hub Node: A(5)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-116.1868	-10.2366	-522.925	-649.3484	177	21	6	18104	6	64	53
A-C	-67.6142	-175.3539	-366.087	-609.0551	151	11	27	16540	14	33	27
A-D	-12.4518	0.0	-50.4729	-62.9247	21	4	3	1728	0	2	3
A-G	-4.0056	0.0	-14.0885	-18.0941	25	1	0	651	0	7	8
A-H	-14.774	0.0	-63.8734	-78.6474	26	1	0	2342	0	4	6
B-C	-9.5637	0.0	-49.8121	-59.3758	18	3	3	1696	0	2	3
B-D	-63.8656	-179.849	-385.916	-629.6305	147	8	28	16387	14	32	23
B-G	0.0	1.356	-34.6122	-33.2562	30	0	0	1548	0	5	5
C-D	-111.8948	-4.8755	-527.642	-644.4123	178	20	6	18242	6	63	53
D-G	0.0	0.0	-0.0068	-0.0068	2	0	0	5	0	3	2
E-F	-108.6257	-15.6815	-513.738	-638.0452	176	22	6	18141	6	64	53
E-G	-72.6848	-181.0751	-381.905	-635.665	145	13	27	16422	14	33	23
E-H	-18.8036	0.0	-53.3988	-72.2024	20	6	3	1761	0	2	3
F-G	-18.6956	0.0	-51.5369	-70.2325	18	3	3	1741	0	2	3
F-H	-69.2295	-181.8834	-387.735	-638.8478	146	15	27	16520	14	33	24
G-H	-119.9194	-11.5449	-534.403	-665.8673	179	20	6	18233	6	65	54

Interface residues

• A-B: ALA110A, ALA110B, ALA163A, ALA163B, ALA165A, ALA165B, ALA184A, ALA184B, ALA299A, ALA299B, ALA302A, ALA302B, ALA358A, ALA358B, ALA363A, ALA363B, ALA378A, ALA378B, ALA385A, ALA385B, ARG234A, ARG234B, ARG297A, ARG297B, ARG380A, ARG380B, ARG383A, ARG383B, ARG386A, ARG386B, ARG399A, ARG399B, ASN159A, ASN159B, ASP162A, ASP162B, ASP229A, ASP229B, ASP384A, ASP384B, ASP61A, GLN278A, GLN278B, GLN308A, GLN308B, GLN362A, GLN362B, GLN365A, GLN365B, GLN398A, GLN398B, GLU156A, GLU156B, GLU228A, GLU228B, GLU354A, GLU354B, GLU375A, GLU375B, GLU379A, GLU379B, GLU389A, GLU389B, GLU396A, GLU396B, GLY158A, GLY158B, GLY160A, GLY160B, GLY164A, GLY164B, GLY232A, GLY232B, GLY301A, GLY301B, GLY368A, GLY368B, GLY369A, GLY369B, GLY371A, GLY371B, GLY393A, GLY393B, HIS361A, HIS361B, HIS381A, HIS381B, HIS64A, HIS64B, ILE233A, ILE233B, ILE282A, ILE282B, ILE310A, ILE310B, ILE364A, ILE364B, ILE366A, ILE366B, ILE387A, ILE387B, ILE390A, ILE390B, ILE397A, ILE397B, LEU231A, LEU231B, LEU304A, LEU304B, LEU307A, LEU307B, LEU350A, LEU350B, LEU367A, LEU367B, LEU400A, LEU400B, LYS226B, LYS227A, LYS227B, LYS230A, LYS230B, LYS313A, LYS313B, LYS349A, LYS349B, LYS62A, LYS62B, MET298A, MET298B, MET370A, MET370B, MET376A, MET376B, PHE261A, PHE261B, PHE300A, PHE300B, PRO157A, PRO157B, SER111A, SER155A, SER155B, SER161A, SER161B, SER236A, SER236B, SER353A, SER353B, SER360A, SER360B, SER395A, SER395B, THR238A, THR238B, THR357A, THR357B, THR374A, THR374B, THR388A, THR388B, THR394A, THR394B, TRP185A, TRP185B, TYR293A, TYR293B, TYR372A, TYR372B, TYR382A, TYR382B, TYR391A, TYR391B, VAL309A, VAL309B, VAL373A, VAL373B
• A-C: ALA283C, ALA286A, ALA286C, ALA290A, ALA290C, ALA294A, ALA294C, ALA315A, ALA315C, ALA318A, ALA318C, ALA320A, ALA320C, ALA324A, ALA324C, ALA331A, ALA331C, ALA346A, ALA346C, ALA348A, ALA348C, ALA351A, ALA351C, ALA352A, ALA352C, ALA355A, ALA403A, ALA403C, ARG107A, ARG107C, ARG325A, ARG325C, ARG330A, ARG330C, ARG399A, ARG399C, ARG408A, ARG408C, ARG411A, ARG411C, ARG46C, ASN292A, ASN292C, ASN296A, ASP288A, ASP288C, ASP316A, ASP316C, CYS289A, CYS289C, GLN284A, GLN284C, GLN308A, GLN308C, GLN311A, GLN311C, GLN398A, GLN398C, GLU295A, GLU295C, GLU322A, GLU322C, GLU344A, GLU344C, GLU354A, GLU354C, GLU396A, GLU396C, GLU414C, GLU50A, GLY404A, GLY404C, HIS405A, HIS405C, ILE310A, ILE310C, ILE397A, ILE397C, ILE402A, ILE402C, LEU287A, LEU287C, LEU304A, LEU304C, LEU307A, LEU307C, LEU314A, LEU314C, LEU319A, LEU319C, LEU321A, LEU321C, LEU326A, LEU326C, LEU327A, LEU327C, LEU334A, LEU334C, LEU350A, LEU350C, LEU400A, LEU400C, LEU406A, LEU406C, LEU407A, LEU407C, LYS306A, LYS306C, LYS313A, LYS313C, LYS343A, LYS343C, LYS349A, LYS349C, MET317A, MET317C, MET333A, MET333C, MET347A, MET347C, PHE312A, PHE312C, PRO303A, PRO303C, SER323A, SER323C, SER353A, SER353C, SER395A, SER395C, SER409A, SER409C, THR285A, THR285C, THR305A, THR305C, THR328A, THR328C, THR394A, THR394C, TRP329A, TRP329C, TYR410A, TYR410C, TYR417C, VAL291A, VAL291C, VAL309A, VAL309C, VAL401A, VAL401C
• A-D: GLN308A, GLN308D, GLN311A, GLN311D, GLN365D, ILE310A, ILE310D, LEU304A, LEU304D, LEU307A, LEU307D, LYS306A, LYS306D, LYS313A, LYS313D, PHE300A, PHE300D, PHE312A, PHE312D, VAL309A, VAL309D
• A-G: ALA165G, ALA184G, ALA204A, ARG171A, ARG203A, ASN159G, ASN240G, ASP162G, ASP202A, GLN206A, GLU156G, GLU244G, GLY158G, GLY160G, GLY181G, ILE242G, LEU205A, LYS226G, PRO157G, SER167A, SER167G, THR169A, THR182A, THR182G, TRP185G
• A-H: ALA204A, ALA294H, ALA299H, ALA302H, ARG171A, ARG203A, ARG297H, ASN207A, ASN292H, ASN296H, ASP202A, GLN206A, GLU295H, GLU375H, GLY301H, LEU205A, LEU304H, LEU367H, LYS208A, MET298H, MET370H, MET376H, PHE300H, PRO303H, THR201A, TYR293H
• B-C: GLN308B, GLN308C, GLN311B, GLN311C, ILE310B, ILE310C, LEU307B, LEU307C, LYS306B, LYS306C, LYS313B, LYS313C, PHE300B, PHE300C, PHE312B, PHE312C, VAL309B, VAL309C
• B-D: ALA283D, ALA286B, ALA286D, ALA290B, ALA290D, ALA294B, ALA294D, ALA315B, ALA315D, ALA318B, ALA318D, ALA320B, ALA320D, ALA324B, ALA324D, ALA331B, ALA331D, ALA346B, ALA346D, ALA348B, ALA348D, ALA351B, ALA351D, ALA352B, ALA352D, ALA403B, ALA403D, ARG107B, ARG107D, ARG325B, ARG325D, ARG330B, ARG330D, ARG399B, ARG399D, ARG408B, ARG408D, ARG411B, ARG411D, ARG46B, ASN292B, ASN292D, ASP288B, ASP288D, ASP316B, ASP316D, CYS289B, CYS289D, GLN284B, GLN284D, GLN308B, GLN308D, GLN311B, GLN311D, GLN398B, GLN398D, GLU295B, GLU295D, GLU322B, GLU322D, GLU344B, GLU344D, GLU354B, GLU354D, GLU396B, GLU396D, GLY404B, GLY404D, HIS405B, HIS405D, ILE310B, ILE310D, ILE397B, ILE397D, ILE402B, ILE402D, LEU287B, LEU287D, LEU304B, LEU304D, LEU307B, LEU307D, LEU314B, LEU314D, LEU319B, LEU319D, LEU321B, LEU321D, LEU326B, LEU326D, LEU327B, LEU327D, LEU334B, LEU334D, LEU34B, LEU350B, LEU350D, LEU400B, LEU400D, LEU406B, LEU406D, LEU407B, LEU407D, LYS306B, LYS306D, LYS313B, LYS313D, LYS339D, LYS343B, LYS343D, LYS349B, LYS349D, MET317B, MET317D, MET333B, MET333D, MET347B, MET347D, PHE312B, PHE312D, PRO303B, PRO303D, SER323B, SER323D, SER353D, SER395B, SER395D, SER409B, SER409D, THR285B, THR285D, THR305B, THR305D, THR328B, THR328D, THR394B, THR394D, TRP329B, TRP329D, TYR410B, TYR410D, VAL291B, VAL291D, VAL309B, VAL309D, VAL401B, VAL401D
• B-G: ALA166G, ALA170G, ALA172G, ALA294B, ALA299B, ALA302B, ARG171G, ARG297B, ASN180G, ASN292B, ASN296B, ASP202G, GLU173G, GLU295B, GLY174G, GLY301B, LEU304B, LYS306B, MET298B, PHE300B, PRO303B, SER167G, SER200G, SER209G, THR168G, THR169G, THR201G, THR305B, TYR293B, VAL178G
• C-D: ALA110C, ALA110D, ALA163C, ALA163D, ALA165C, ALA165D, ALA184C, ALA184D, ALA299C, ALA299D, ALA302C, ALA302D, ALA356D, ALA358C, ALA358D, ALA363C, ALA363D, ALA378C, ALA378D, ALA385C, ALA385D, ARG234C, ARG234D, ARG297C, ARG297D, ARG380C, ARG380D, ARG383C, ARG383D, ARG386C, ARG386D, ARG399C, ARG399D, ASN159C, ASN159D, ASP162C, ASP162D, ASP229C, ASP229D, ASP384C, ASP384D, GLN278C, GLN278D, GLN308C, GLN308D, GLN362C, GLN362D, GLN365C, GLN365D, GLN398C, GLN398D, GLU156C, GLU156D, GLU228C, GLU228D, GLU354C, GLU354D, GLU375C, GLU375D, GLU379C, GLU379D, GLU389C, GLU389D, GLU396C, GLU396D, GLY158C, GLY158D, GLY160C, GLY160D, GLY164C, GLY164D, GLY232C, GLY232D, GLY301C, GLY301D, GLY368C, GLY368D, GLY369C, GLY369D, GLY371C, GLY371D, GLY393C, GLY393D, HIS361C, HIS361D, HIS381C, HIS381D, HIS64C, HIS64D, ILE233C, ILE233D, ILE282C, ILE282D, ILE310C, ILE310D, ILE364C, ILE364D, ILE366C, ILE366D, ILE387C, ILE387D, ILE390C, ILE390D, ILE397C, ILE397D, LEU231C, LEU231D, LEU304C, LEU304D, LEU307C, LEU307D, LEU350C, LEU350D, LEU367C, LEU367D, LEU400C, LEU400D, LYS226D, LYS227C, LYS227D, LYS230C, LYS230D, LYS313C, LYS313D, LYS349C, LYS349D, LYS62C, LYS62D, MET298C, MET298D, MET370C, MET370D, MET376C, MET376D, PHE261C, PHE261D, PHE300C, PHE300D, PRO157C, PRO157D, SER111D, SER155C, SER155D, SER161C, SER161D, SER236C, SER236D, SER353C, SER353D, SER360C, SER360D, SER395C, SER395D, THR238C, THR238D, THR357C, THR357D, THR374C, THR374D, THR388C, THR388D, THR394C, THR394D, TRP185C, TRP185D, TYR293C, TYR293D, TYR372C, TYR372D, TYR382C, TYR382D, TYR391C, TYR391D, VAL114D, VAL309C, VAL309D, VAL373C, VAL373D
• D-G: ARG411D, ASP202G
• E-F: ALA110E, ALA163E, ALA163F, ALA165E, ALA165F, ALA184E, ALA184F, ALA299E, ALA299F, ALA302E, ALA302F, ALA358E, ALA358F, ALA363E, ALA363F, ALA378E, ALA378F, ALA385E, ALA385F, ARG234E, ARG234F, ARG297E, ARG297F, ARG380E, ARG380F, ARG383E, ARG383F, ARG386E, ARG386F, ARG399E, ARG399F, ASN159E, ASN159F, ASP162E, ASP162F, ASP229E, ASP229F, ASP384E, ASP384F, ASP61E, GLN278E, GLN278F, GLN308E, GLN308F, GLN362E, GLN362F, GLN365E, GLN365F, GLN398E, GLN398F, GLU156E, GLU156F, GLU228E, GLU228F, GLU354E, GLU354F, GLU375E, GLU375F, GLU379E, GLU379F, GLU389E, GLU389F, GLU396E, GLU396F, GLY158E, GLY158F, GLY160E, GLY160F, GLY164E, GLY164F, GLY232E, GLY232F, GLY301E, GLY301F, GLY368E, GLY368F, GLY369E, GLY369F, GLY371E, GLY371F, GLY393E, GLY393F, HIS361E, HIS361F, HIS381E, HIS381F, HIS64E, HIS64F, ILE233E, ILE233F, ILE282E, ILE282F, ILE310E, ILE310F, ILE364E, ILE364F, ILE366E, ILE366F, ILE387E, ILE387F, ILE390E, ILE390F, ILE397E, ILE397F, LEU231E, LEU231F, LEU304E, LEU304F, LEU307E, LEU307F, LEU350E, LEU350F, LEU367E, LEU367F, LEU400E, LEU400F, LYS226F, LYS227E, LYS227F, LYS230E, LYS230F, LYS313E, LYS313F, LYS349E, LYS349F, LYS62E, LYS62F, MET298E, MET298F, MET370E, MET370F, MET376E, MET376F, PHE261E, PHE261F, PHE300E, PHE300F, PRO157E, PRO157F, SER111E, SER155E, SER155F, SER161E, SER161F, SER236E, SER236F, SER353E, SER353F, SER360E, SER360F, SER395E, SER395F, THR238E, THR238F, THR357E, THR357F, THR374E, THR374F, THR388E, THR388F, THR394E, THR394F, TRP185E, TRP185F, TYR293E, TYR293F, TYR372E, TYR372F, TYR382E, TYR382F, TYR391E, TYR391F, VAL309E, VAL309F, VAL373E, VAL373F
• E-G: ALA283G, ALA286G, ALA290E, ALA290G, ALA294E, ALA294G, ALA315E, ALA315G, ALA318E, ALA318G, ALA320E, ALA320G, ALA324E, ALA324G, ALA331E, ALA331G, ALA346E, ALA346G, ALA348E, ALA348G, ALA351E, ALA351G, ALA352E, ALA352G, ALA403E, ALA403G, ALA413E, ARG107E, ARG107G, ARG325E, ARG325G, ARG330E, ARG330G, ARG399E, ARG399G, ARG408E, ARG408G, ARG411E, ARG411G, ARG46G, ASN292E, ASN292G, ASP288E, ASP288G, ASP316E, ASP316G, CYS289E, CYS289G, GLN284E, GLN284G, GLN308E, GLN308G, GLN311E, GLN311G, GLN398E, GLN398G, GLU295E, GLU295G, GLU322E, GLU322G, GLU344E, GLU344G, GLU354E, GLU354G, GLU396E, GLU396G, GLY404E, GLY404G, HIS405E, HIS405G, ILE310E, ILE310G, ILE397E, ILE397G, ILE402E, ILE402G, LEU287E, LEU287G, LEU304E, LEU304G, LEU307E, LEU307G, LEU314E, LEU314G, LEU319E, LEU319G, LEU321E, LEU321G, LEU326E, LEU326G, LEU327E, LEU327G, LEU334E, LEU334G, LEU350E, LEU350G, LEU400E, LEU400G, LEU406E, LEU406G, LEU407E, LEU407G, LYS306E, LYS306G, LYS313E, LYS313G, LYS343E, LYS343G, LYS349E, LYS349G, MET317E, MET317G, MET333E, MET333G, MET347E, MET347G, PHE312E, PHE312G, PRO303E, PRO303G, SER323E, SER323G, SER353E, SER395E, SER395G, SER409E, SER409G, THR285E, THR285G, THR305E, THR305G, THR328E, THR328G, THR394E, THR394G, TRP329E, TRP329G, TYR410E, TYR410G, VAL291E, VAL291G, VAL309E, VAL309G, VAL401E, VAL401G
• E-H: GLN308E, GLN308H, GLN311E, GLN311H, GLN365E, ILE310E, ILE310H, LEU304H, LEU307E, LEU307H, LYS306E, LYS306H, LYS313E, LYS313H, PHE300E, PHE300H, PHE312E, PHE312H, VAL309E, VAL309H
• F-G: GLN308F, GLN308G, GLN311F, GLN311G, ILE310F, ILE310G, LEU307F, LEU307G, LYS306F, LYS306G, LYS313F, LYS313G, PHE300F, PHE300G, PHE312F, PHE312G, VAL309F, VAL309G
• F-H: ALA283H, ALA286F, ALA286H, ALA290F, ALA290H, ALA294F, ALA294H, ALA315F, ALA315H, ALA318F, ALA318H, ALA320F, ALA320H, ALA324F, ALA324H, ALA331F, ALA331H, ALA346F, ALA346H, ALA348F, ALA348H, ALA351F, ALA351H, ALA352F, ALA352H, ALA403F, ALA403H, ALA413F, ARG107F, ARG107H, ARG325F, ARG325H, ARG330F, ARG330H, ARG399F, ARG399H, ARG408F, ARG408H, ARG411F, ARG411H, ARG46F, ARG46H, ASN292F, ASN292H, ASP288F, ASP288H, ASP316F, ASP316H, CYS289F, CYS289H, GLN284F, GLN284H, GLN308F, GLN308H, GLN311F, GLN311H, GLN398F, GLN398H, GLU295F, GLU295H, GLU322F, GLU322H, GLU344F, GLU344H, GLU354F, GLU354H, GLU396F, GLU396H, GLY404F, GLY404H, HIS405F, HIS405H, ILE310F, ILE310H, ILE397F, ILE397H, ILE402F, ILE402H, LEU287F, LEU287H, LEU304F, LEU304H, LEU307F, LEU307H, LEU314F, LEU314H, LEU319F, LEU319H, LEU321F, LEU321H, LEU326F, LEU326H, LEU327F, LEU327H, LEU334F, LEU334H, LEU350F, LEU350H, LEU400F, LEU400H, LEU406F, LEU406H, LEU407F, LEU407H, LYS306F, LYS306H, LYS313F, LYS313H, LYS343F, LYS343H, LYS349F, LYS349H, MET317F, MET317H, MET333F, MET333H, MET347F, MET347H, PHE312F, PHE312H, PRO303F, PRO303H, SER323F, SER323H, SER395F, SER395H, SER409F, SER409H, THR285F, THR285H, THR305F, THR305H, THR328F, THR328H, THR394F, THR394H, TRP329F, TRP329H, TYR410F, TYR410H, VAL291F, VAL291H, VAL309F, VAL309H, VAL401F, VAL401H
• G-H: ALA110G, ALA110H, ALA163G, ALA163H, ALA165G, ALA165H, ALA184G, ALA184H, ALA299G, ALA299H, ALA302G, ALA302H, ALA358G, ALA358H, ALA363G, ALA363H, ALA378G, ALA378H, ALA385G, ALA385H, ARG234G, ARG234H, ARG297G, ARG297H, ARG380G, ARG380H, ARG383G, ARG383H, ARG386G, ARG386H, ARG399G, ARG399H, ASN159G, ASN159H, ASN207G, ASN240G, ASP162G, ASP162H, ASP229G, ASP229H, ASP384G, ASP384H, GLN206G, GLN278G, GLN278H, GLN308G, GLN362G, GLN362H, GLN365G, GLN365H, GLN398G, GLN398H, GLU156G, GLU156H, GLU228G, GLU228H, GLU354G, GLU354H, GLU375G, GLU375H, GLU379G, GLU379H, GLU389G, GLU389H, GLU396G, GLU396H, GLY158G, GLY158H, GLY160G, GLY160H, GLY164G, GLY164H, GLY232G, GLY232H, GLY301G, GLY301H, GLY368G, GLY368H, GLY369G, GLY369H, GLY371G, GLY371H, GLY393G, GLY393H, HIS361G, HIS361H, HIS381H, HIS64G, HIS64H, ILE233G, ILE233H, ILE282G, ILE282H, ILE310G, ILE310H, ILE364G, ILE364H, ILE366G, ILE366H, ILE387G, ILE387H, ILE390G, ILE390H, ILE397G, ILE397H, LEU231G, LEU231H, LEU304G, LEU304H, LEU307G, LEU307H, LEU350G, LEU350H, LEU367G, LEU367H, LEU400G, LEU400H, LYS226G, LYS226H, LYS227G, LYS227H, LYS230G, LYS230H, LYS313G, LYS313H, LYS349G, LYS349H, LYS62G, LYS62H, MET298G, MET298H, MET370G, MET370H, MET376G, MET376H, PHE261G, PHE261H, PHE300G, PHE300H, PRO157G, PRO157H, SER111H, SER155G, SER155H, SER161G, SER161H, SER236G, SER236H, SER353G, SER353H, SER360G, SER360H, SER395G, SER395H, THR238G, THR238H, THR357G, THR357H, THR374G, THR374H, THR388G, THR388H, THR394G, THR394H, TRP185G, TRP185H, TYR293G, TYR293H, TYR372G, TYR372H, TYR382G, TYR382H, TYR391G, TYR391H, VAL114H, VAL309G, VAL309H, VAL373G, VAL373H