2VDI
crystal structure of chlamydomonas reinhardtii rubisco with a large-subunit c192s mutation
Total interactions analyzed 120
Total true interactions 60
Strongest Interaction Chains A-B
Int. Res. 408
Norm. En. per Res. -4.6546
Hub Node A(8)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -320.7538 -88.0155 -1490.32 -1899.0893 408 49 30 59365 24 96 96
A-C -5.3305 -39.7988 -95.5373 -140.6666 53 3 1 4223 4 24 28
A-D -9.1831 -46.9015 -73.6541 -129.7388 63 5 1 3840 2 29 19
A-G -16.0312 -40.7881 -102.824 -159.6433 53 6 1 4456 4 24 30
A-I -70.8841 -6.9975 -518.389 -596.2705 172 22 6 19630 4 39 35
A-L -4.3679 0.0 -105.774 -110.1419 36 0 4 3919 0 3 3
A-M 0.0 0.0 -0.0004 -0.0004 2 0 0 1 0 2 0
A-O -62.8488 -33.8505 -276.305 -373.0043 99 12 7 10623 2 26 26
B-D -14.5482 -38.9829 -94.6998 -148.2309 53 6 1 4252 4 24 29
B-G -10.4592 -46.9327 -83.5234 -140.9154 62 4 1 3943 2 28 19
B-H -10.7684 -43.2042 -102.459 -156.4316 55 8 1 4431 4 24 30
B-J -63.6779 -9.5836 -498.758 -572.0195 169 18 7 19487 4 38 35
B-L -43.6866 -33.4692 -264.911 -342.0668 99 12 5 10414 2 26 26
B-N 0.0 0.0 -0.0007 -0.0007 2 0 0 2 0 2 0
B-O -19.7023 2.9744 -129.618 -146.3459 43 1 4 4762 0 4 5
C-D -294.1761 -86.5706 -983.659 -1364.4058 409 51 30 59034 24 96 95
C-E -12.2137 -41.2716 -98.4744 -151.9596 54 8 1 4389 4 24 30
C-F -19.1502 -45.7035 -83.511 -148.3647 63 3 1 3892 2 30 19
C-I -41.9155 -37.6174 -267.46 -346.9928 99 11 5 10379 2 26 26
C-K -84.5472 -9.7951 -502.592 -596.9344 172 22 7 19403 5 39 35
C-N 0.0 0.0 -99.3042 -99.3042 36 0 3 3816 0 3 4
C-O 0.0 0.0 -0.0004 -0.0004 2 0 0 1 0 2 0
D-F -19.4913 -40.0872 -98.7326 -158.3111 53 6 1 4376 4 24 30
D-I 0.0 0.0 -105.009 -105.009 37 0 4 3934 0 3 4
D-L -59.3754 -8.6113 -500.586 -568.5728 172 17 6 19255 4 38 35
D-N -56.3981 -32.9843 -265.299 -354.6814 98 10 5 10463 2 26 26
D-P 0.0 0.0 -0.0007 -0.0007 2 0 0 2 0 2 0
E-F -309.9701 -87.1549 -992.068 -1389.193 412 49 30 59039 24 96 96
E-G -7.6616 -40.5592 -93.8076 -142.0284 54 6 1 4247 4 23 30
E-H -18.6363 -48.5747 -83.0378 -150.2488 62 2 1 3889 3 29 19
E-I 0.0 0.0 -0.0004 -0.0004 2 0 0 1 0 2 0
E-K -48.5795 -32.0344 -273.68 -354.2939 97 13 6 10541 2 26 26
E-M -83.1907 -5.4714 -500.922 -589.5841 171 15 7 19412 5 38 35
E-P 0.0 0.0 -101.2 -101.2 37 0 4 3825 0 3 4
F-H -16.7674 -40.1821 -97.203 -154.1526 54 7 1 4272 4 24 29
F-J 0.0 0.0 -0.0004 -0.0004 2 0 0 1 0 2 0
F-K 0.0 0.0 -100.876 -100.876 36 0 3 3842 0 3 4
F-N -68.4436 -6.425 -497.587 -572.4555 172 20 7 19407 4 37 35
F-P -50.6967 -37.3826 -265.266 -353.3453 100 16 6 10449 2 26 26
G-H -303.3451 -90.8534 -1014.43 -1408.6285 411 48 30 59084 24 96 97
G-J -9.9044 0.0 -108.053 -117.9574 38 1 3 4080 0 3 4
G-K 0.0 0.0 -0.0004 -0.0004 2 0 0 1 0 2 0
G-M -44.5295 -30.8813 -256.032 -331.4428 99 12 5 10407 2 26 26
G-O -86.2949 -12.0279 -501.488 -599.8108 171 18 6 19412 5 37 36
H-J -49.946 -33.2707 -268.655 -351.8717 99 16 6 10697 2 26 27
H-L 0.0 0.0 -0.0004 -0.0004 2 0 0 1 0 2 0
H-M 0.0 0.0 -108.015 -108.015 36 0 4 3948 0 3 3
H-P -81.1497 -9.6723 -506.108 -596.93 172 24 7 19655 5 37 36
I-K -15.2594 0.0 -121.294 -136.5534 61 3 4 5053 0 9 8
I-M 0.0 0.0 -0.2762 -0.2762 8 0 0 80 0 0 1
I-O -14.225 0.0 -121.133 -135.358 61 3 4 5112 0 9 8
J-L -15.0707 0.0 -120.747 -135.8177 60 2 4 5041 0 8 7
J-N 0.0 0.0 -0.1887 -0.1887 6 0 0 61 0 0 1
J-P -12.9455 0.0 -122.895 -135.8405 63 4 4 5122 0 9 8
K-M -20.6763 0.0 -126.028 -146.7043 65 6 4 5231 0 9 8
K-O 0.0 0.0 -0.2292 -0.2292 6 0 0 67 0 0 1
L-N -18.3012 0.0 -128.205 -146.5062 64 4 4 5240 0 9 9
L-P 0.0 0.0 -0.4039 -0.4039 8 0 0 92 0 0 1
M-O -18.663 0.0 -119.842 -138.505 63 2 4 5047 0 9 7
N-P -15.9901 0.0 -117.325 -133.3151 61 2 4 4941 0 9 7