2UUC
structure of the thermus thermophilus 30s ribosomal subunit complexed with a valine-asl with cmo5u in position 34 bound to an mrna with a gua-codon in the a-site and paromomycin.
Total interactions analyzed 276
Total true interactions 26
Strongest Interaction Chains J-N
Int. Res. 55
Norm. En. per Res. -5.783
Hub Node C(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
B-C 0.0 0.0 -1.7529 -1.7529 5 0 0 144 0 2 5
B-E 0.0 0.0 -0.0024 -0.0024 5 0 0 4 0 0 2
B-H -22.0807 -43.8256 -64.7893 -130.6956 33 13 0 2844 2 17 17
C-D 0.0 1.1242 -0.2502 0.874 5 0 0 59 0 0 10
C-E 0.0 -19.1843 -15.0976 -34.282 13 2 0 792 0 6 4
C-J 0.0 4.575 -81.8566 -77.2816 53 3 2 3434 0 14 24
C-N -16.0516 6.481 -226.139 -235.7096 75 8 3 9189 0 19 38
D-E -2.0929 -47.069 -33.0887 -82.2505 41 3 0 1961 4 7 9
E-H -35.7229 -30.153 -149.217 -215.0929 63 13 2 6492 2 42 43
F-O 0.0 0.0 -1.9169 -1.9169 5 0 0 166 0 3 2
F-R -75.516 -35.6425 -302.635 -413.7935 88 29 8 11055 3 14 23
G-I -6.9464 2.5242 -25.5405 -29.9627 33 5 4 1878 0 5 8
G-K 0.0 0.0 -49.9851 -49.9851 27 2 3 2132 0 1 7
G-U 0.0 0.0 -0.0126 -0.0126 2 0 0 10 0 1 0
H-L 0.0 0.0 -8.3117 -8.3117 10 3 0 414 0 0 1
H-Q 0.0 4.1991 -17.2511 -13.052 14 3 0 1246 0 2 8
I-J 0.0 -0.9951 -32.0965 -33.0916 16 1 0 1237 0 10 16
I-M 0.0 2.8043 -5.8201 -3.0157 6 2 0 318 0 0 3
I-N -10.2877 0.0 -12.9405 -23.2282 8 1 0 537 0 0 0
J-N -58.5986 -53.5881 -205.878 -318.0646 55 27 7 8685 4 13 35
K-R -11.5033 -26.2466 -78.9345 -116.6844 37 3 2 3507 2 14 17
L-Q 0.0 0.0 -53.7495 -53.7495 21 1 4 2366 0 0 8
M-S -7.0587 21.62 -88.4159 -73.8547 47 5 0 4028 0 8 24
M-U 0.0 2.5978 -2.4739 0.1239 11 0 0 377 0 5 9
N-S 0.0 0.0 -0.2779 -0.2779 4 0 0 59 0 1 0
O-Q 0.0 0.0 -0.2565 -0.2565 9 0 0 87 0 6 6