2RFK

substrate rna positioning in the archaeal h/aca ribonucleoprotein complex

• Total interactions analyzed: 15
• Total true interactions: 2
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 111
  • Norm. En. per Res.: -5.5104
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-65.0406	-182.3671	-364.244	-611.6517	111	17	9	14586	11	65	51
A-C	-21.3886	-30.6467	-255.3	-307.3353	81	18	10	10285	6	16	20

Interface residues

• A-B: ALA115A, ALA30B, ALA67A, ARG11A, ARG13B, ARG169A, ARG174A, ARG204A, ARG205A, ARG34B, ARG45B, ARG46B, ARG47B, ARG4B, ARG50B, ARG6B, ASP170A, ASP214A, ASP222A, ASP225A, ASP233A, ASP39B, ASP55A, CYS20B, GLU162A, GLU165A, GLU167A, GLU202A, GLU213A, GLU232A, GLU237A, GLU38B, GLU43B, GLU51B, GLU64A, GLY12B, GLY234A, GLY42B, GLY54B, GLY59A, GLY90A, HIS118A, HIS221A, HIS31B, ILE166A, ILE218A, ILE235A, ILE55B, ILE5B, ILE69A, ILE72A, LEU116A, LEU164A, LEU16B, LEU172A, LEU203A, LEU217A, LEU220A, LEU223A, LEU53B, LEU54A, LYS17B, LYS231A, LYS241A, LYS49B, LYS56A, LYS71A, LYS7B, LYS87A, MET117A, MET200A, PHE173A, PHE229A, PHE35B, PHE3B, PRO21B, PRO32B, PRO33B, PRO37B, PRO40B, PRO57A, PRO58A, PRO60A, PRO86A, SER201A, SER36B, SER89A, THR15B, THR206A, THR219A, THR27B, TRP230A, TRP48B, TRP68A, TYR113A, TYR14B, TYR226A, TYR227A, TYR228A, TYR238A, TYR41B, VAL114A, VAL163A, VAL171A, VAL19B, VAL224A, VAL29B, VAL52B, VAL65A, VAL88A, VAL91A
• A-C: ALA11C, ALA193A, ALA198A, ALA54C, ARG142A, ARG146A, ARG154A, ARG156A, ARG169A, ARG19C, ARG29C, ASN27C, ASP122A, ASP28C, ASP43C, GLN130A, GLN13C, GLN141A, GLU134A, GLU136A, GLU138A, GLU74C, GLY121A, GLY137A, GLY14C, GLY191A, GLY195A, GLY197A, GLY46C, HIS118A, HIS120A, HIS188A, HIS189A, HIS199A, HIS9C, ILE139A, ILE140A, ILE17C, ILE190A, ILE40C, ILE55C, LEU119A, LEU145A, LEU153A, LEU186A, LEU192A, LEU194A, LEU26C, LEU8C, LYS12C, LYS133A, LYS157A, LYS2C, LYS42C, LYS49C, MET132A, MET50C, PHE135A, PHE15C, PHE45C, PRO143A, PRO144A, PRO24C, PRO47C, PRO51C, SER185A, SER25C, THR155A, THR20C, TRP22C, TYR10C, TYR52C, VAL123A, VAL131A, VAL158A, VAL196A, VAL23C, VAL41C, VAL44C, VAL48C, VAL53C