2RB3

crystal structure of human saposin d

• Total interactions analyzed: 6
• Total true interactions: 5
• Strongest Interaction:
  • Chains: B-C
  • Int. Res.: 48
  • Norm. En. per Res.: -4.0179
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-33.2011	-5.8286	-96.8796	-135.9092	45	4	1	3767	2	7	14
A-C	0.0	0.0	-0.018	-0.018	4	0	0	4	0	1	1
A-D	-18.7762	9.1183	-154.299	-163.9569	47	8	1	5288	0	10	14
B-C	-20.4873	9.1779	-181.548	-192.8574	48	6	2	5796	0	10	14
B-D	0.0	8.0958	-0.7714	7.3244	7	0	0	109	0	2	4

Interface residues

• A-B: ALA30A, ALA31A, ARG17A, ARG17B, ASN18A, ASN18B, ASP16B, ASP41A, ASP41B, ASP48A, CYS36A, CYS36B, GLN26A, GLN44A, GLN44B, GLU20B, GLU27A, GLU33A, GLY13B, GLY35A, GLY35B, LEU11B, LEU15B, LEU19A, LEU19B, LEU39A, LEU39B, LYS10B, LYS34A, LYS34B, LYS45A, LYS9B, PHE38A, PHE38B, PRO40A, PRO40B, PRO42A, PRO42B, SER37A, SER37B, TYR14A, TYR14B, TYR43A, TYR43B, VAL12B
• A-C: ASP41C, GLU27A, LYS34A, PRO42C
• A-D: ALA2A, ALA2D, ALA52A, ALA52D, ALA77A, ASP41A, ASP41D, ASP48A, ASP48D, CYS47A, CYS47D, CYS5A, CYS5D, GLN44A, GLN44D, GLN46A, GLN46D, GLN49A, GLN49D, GLU53A, GLU53D, GLU6A, GLU6D, GLY3A, GLY3D, LEU39A, LEU39D, LYS10A, LYS10D, LYS45A, LYS45D, PHE4A, PHE4D, PHE50A, PHE50D, PRO40A, PRO40D, PRO42A, PRO42D, SER80A, TYR43A, TYR43D, TYR54A, TYR54D, VAL51D, VAL7A, VAL7D
• B-C: ALA2B, ALA2C, ALA52B, ALA52C, ALA77C, ASP41B, ASP41C, ASP48B, ASP48C, CYS47B, CYS47C, CYS5B, CYS5C, GLN44B, GLN44C, GLN46B, GLN46C, GLN49B, GLN49C, GLU53B, GLU53C, GLU6B, GLU6C, GLY3B, GLY3C, LEU39B, LEU39C, LYS10B, LYS10C, LYS45B, LYS45C, PHE4B, PHE4C, PHE50B, PHE50C, PRO40B, PRO40C, PRO42B, PRO42C, SER80B, TYR43B, TYR43C, TYR54B, TYR54C, VAL51B, VAL51C, VAL7B, VAL7C
• B-D: ARG17B, ASN18B, ASP41D, GLU20B, LEU19B, LYS21B, PRO42D