2R5H
pentamer structure of major capsid protein l1 of human papilloma virus type 16
Total interactions analyzed 105
Total true interactions 70
Strongest Interaction Chains A-B
Int. Res. 293
Norm. En. per Res. -3.8618
Hub Node A(8)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -178.5606 -15.7256 -937.227 -1131.5132 293 126 19 40495 8 79 66
A-C -12.8574 0.0 -33.5193 -46.3767 18 3 1 1456 0 1 3
A-D -11.1592 0.0 -33.6995 -44.8587 18 1 1 1454 0 1 3
A-E -141.8303 -2.2278 -901.933 -1045.9911 290 113 19 39034 5 77 64
A-F 0.0 -1.9005 -41.3791 -43.2796 47 1 2 2294 0 6 7
A-G 0.0 0.0 -0.3687 -0.3687 5 0 0 102 0 1 0
A-I 0.0 0.0 -8.1353 -8.1353 11 0 0 342 0 2 3
A-J 0.0 -5.4466 -6.9815 -12.4281 26 0 0 435 2 5 5
B-C -157.9124 7.1272 -896.08 -1046.8652 292 106 19 39375 6 75 64
B-D -13.5036 0.0 -32.6087 -46.1123 16 2 1 1401 0 1 2
B-E -15.7777 0.0 -38.6826 -54.4603 19 3 1 1577 0 1 3
B-F -4.5381 -11.9292 -6.2454 -22.7127 26 0 0 408 1 5 5
B-G -3.0572 -3.032 -40.9628 -47.052 47 1 2 2309 0 6 6
B-H 0.0 0.0 -0.0984 -0.0984 5 0 0 46 0 1 0
B-J 0.0 5.2798 -10.3317 -5.0519 13 1 0 446 0 2 3
C-D -163.2131 -32.764 -897.192 -1093.1691 288 103 18 39488 7 75 66
C-E -14.8064 0.0 -36.5049 -51.3113 19 4 1 1498 0 1 3
C-F 0.0 5.1443 -9.5963 -4.452 14 0 0 390 0 2 3
C-G 0.0 -8.3896 -4.9146 -13.3042 24 0 0 339 1 6 5
C-H 0.0 -0.9696 -39.4937 -40.4633 45 0 2 2224 0 6 6
C-I 0.0 0.0 -0.1436 -0.1436 5 0 0 52 0 1 0
D-E -135.6645 7.3552 -932.42 -1060.7293 292 101 20 39472 8 77 66
D-G 0.0 5.3573 -6.719 -1.3617 12 0 0 328 0 2 3
D-H 0.0 -8.1925 -4.6516 -12.844 23 0 0 286 1 5 5
D-I 0.0 -1.9808 -34.0407 -36.0215 42 2 2 2118 0 6 6
D-J 0.0 0.0 -0.1128 -0.1128 5 0 0 48 0 1 0
E-F 0.0 0.0 -0.1092 -0.1092 5 0 0 52 0 1 0
E-H 0.0 0.0 -6.1668 -6.1668 10 0 0 320 0 2 3
E-I 0.0 -9.1103 -5.5858 -14.6961 24 0 0 352 1 5 5
E-J -2.3465 -1.0385 -29.861 -33.246 48 6 2 2149 0 6 6
F-G -188.3099 4.1396 -887.689 -1071.8593 292 113 19 39134 6 75 63
F-H -10.2346 0.0 -32.3192 -42.5538 17 1 1 1379 0 1 2
F-I -14.9306 0.0 -38.8358 -53.7664 19 5 1 1549 0 1 3
F-J -139.7104 -2.0935 -953.786 -1095.59 290 135 21 40709 6 80 67
F-K 0.0 0.0 -0.1112 -0.1112 5 0 0 43 0 1 0
F-M 0.0 3.9209 -8.9196 -4.9987 11 0 0 381 0 2 3
F-N 0.0 -10.3155 -6.379 -16.6945 24 0 0 404 1 5 5
F-O -2.7977 -2.7399 -44.2985 -49.836 47 0 2 2302 0 6 6
G-H -146.6764 -23.6439 -901.659 -1071.9793 289 104 20 39634 7 76 66
G-I -20.3022 0.0 -40.1971 -60.4993 19 7 1 1649 0 1 3
G-J -13.1922 0.0 -34.52 -47.7122 18 2 1 1480 0 1 3
G-K 0.0 -1.005 -40.3454 -41.3504 45 0 1 2196 0 6 6
G-L 0.0 0.0 -0.0442 -0.0442 5 0 0 27 0 1 0
G-N 0.0 0.0 -10.9534 -10.9534 13 0 0 368 0 2 3
G-O 0.0 -9.0941 -4.6209 -13.715 24 0 0 305 1 5 5
H-I -180.7641 5.771 -929.344 -1104.3371 292 124 20 40079 7 76 64
H-J -12.417 0.0 -35.7669 -48.1839 17 1 1 1478 0 1 2
H-K 0.0 -9.4777 -4.4418 -13.9195 19 0 0 278 1 4 5
H-L 0.0 -1.8254 -30.6398 -32.4652 41 0 1 1920 0 6 6
H-M 0.0 0.0 -0.1728 -0.1728 5 0 0 60 0 1 0
H-O 0.0 0.0 -5.7998 -5.7998 10 0 0 283 0 2 3
I-J -149.0864 28.2017 -908.051 -1028.9357 291 112 19 39140 6 78 64
I-K 0.0 0.0 -7.302 -7.302 11 0 0 311 0 2 3
I-L 0.0 -9.7219 -5.8689 -15.5908 24 0 0 352 1 5 5
I-M 0.0 -0.9482 -22.5954 -23.5436 47 7 2 2034 0 6 6
I-N 0.0 0.0 -0.0953 -0.0953 5 0 0 46 0 1 0
J-L 0.0 0.0 -8.6098 -8.6098 10 0 0 337 0 2 3
J-M 0.0 -4.197 -8.5326 -12.7296 28 0 0 509 1 5 5
J-N -2.2007 -1.9282 -47.4044 -51.5334 52 0 2 2348 0 6 6
J-O 0.0 0.0 -0.3145 -0.3145 5 0 0 89 0 1 0
K-L -155.6101 -13.0883 -927.329 -1096.0274 292 139 21 41739 7 80 67
K-M -10.1663 0.0 -36.1054 -46.2717 19 2 1 1486 0 1 3
K-N -9.0866 0.0 -27.555 -36.6416 17 1 1 1317 0 1 2
K-O -137.3434 -16.6628 -864.831 -1018.8372 287 110 19 39053 5 77 66
L-M -111.548 8.6845 -895.183 -998.0464 290 86 18 38709 5 77 67
L-N -9.9048 0.0 -26.2197 -36.1245 16 2 1 1379 0 1 2
L-O -20.0259 0.0 -39.6877 -59.7136 21 7 1 1695 0 1 3
M-N -134.0646 3.5354 -919.129 -1049.6582 291 108 18 39414 6 75 66
M-O -16.602 0.0 -35.2554 -51.8574 18 1 1 1487 0 1 2
N-O -175.4637 -42.2615 -887.325 -1105.0503 290 123 18 39282 8 74 65