2QLC

the crystal structure of dna repair protein radc from chlorobium tepidum tls

• Total interactions analyzed: 28
• Total true interactions: 15
• Strongest Interaction:
  • Chains: D-H
  • Int. Res.: 57
  • Norm. En. per Res.: -3.0872
• Hub Node: A(4)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-D	-14.1762	-4.0159	-113.823	-132.0151	54	11	3	5235	0	13	17
A-F	0.0	0.0	-0.3205	-0.3205	9	0	0	89	0	1	2
A-G	-7.9557	13.3326	-157.877	-152.5001	58	8	8	7560	0	19	19
A-H	0.0	0.0	-0.0802	-0.0802	4	0	0	23	0	0	0
B-C	-12.4921	0.3192	-105.668	-117.8408	52	4	2	4635	0	13	17
B-E	-11.7808	9.0815	-164.469	-167.1683	61	6	7	7681	0	20	20
B-G	0.0	0.0	-0.0467	-0.0467	3	0	0	18	0	0	0
B-H	-16.0671	5.2255	-59.5766	-70.4183	34	3	0	2342	0	9	15
C-E	0.0	0.0	-0.5854	-0.5854	4	0	0	55	0	0	0
C-F	-17.6192	8.6054	-154.987	-164.0007	58	4	6	7571	0	21	21
C-G	-11.5155	4.8665	-73.8681	-80.5172	37	2	0	3275	0	9	13
D-E	-7.1667	0.0	-5.8328	-12.9996	12	0	0	287	0	1	1
D-H	-33.3583	9.8407	-152.453	-175.9706	57	9	6	7408	0	20	20
E-F	-17.5691	-1.1521	-115.544	-134.2651	54	7	2	5236	0	16	17
G-H	-14.2345	2.0528	-99.1341	-111.3159	50	3	2	4436	0	15	17

Interface residues

• A-D: ALA51D, ALA62D, ALA8A, ARG121A, ARG57D, ARG65D, ARG9A, ASN2A, ASN36A, ASP108A, ASP10A, ASP122A, GLN37A, GLU105A, GLU25D, GLU42D, GLU58D, GLY47D, GLY7A, HIS109A, HIS26D, HIS69A, ILE44D, ILE46D, ILE54D, ILE71A, ILE72A, LEU106A, LEU107A, LEU126A, LEU27D, LEU30A, LEU32A, LEU49D, LEU53D, LYS24D, LYS35A, LYS4A, LYS61D, LYS6A, PHE120A, SER119A, SER33A, SER52D, SER70A, THR34A, THR43D, THR45D, THR48D, THR50D, TRP117A, VAL110A, VAL11A, VAL5A
• A-F: ASN86A, ASN86F, ASP81A, GLN83A, GLN90A, GLN90F, LYS89A, LYS97F, SER93F
• A-G: ALA51A, ALA62A, ALA62G, ALA63A, ALA63G, ALA68G, ALA98A, ALA98G, ARG57A, ARG57G, ARG65A, ARG65G, ASP100A, ASP100G, GLN103A, GLN103G, GLU105G, GLU58A, GLU58G, GLU66G, GLY99A, GLY99G, HIS55A, HIS55G, HIS69G, ILE104A, ILE104G, ILE54A, ILE59A, ILE59G, ILE64A, ILE64G, ILE94A, ILE94G, LEU101A, LEU101G, LEU102A, LEU102G, LEU32G, LEU53A, LEU95A, LEU95G, LYS61A, LYS61G, LYS96A, LYS97A, LYS97G, PHE60A, PHE60G, PRO56A, PRO56G, SER52A, SER52G, SER67A, SER67G, SER70G, SER93A, THR34G
• A-H: GLN103A, GLN103H, HIS69A, HIS69H
• B-C: ALA51B, ALA8C, ARG121C, ARG57B, ARG65B, ARG9C, ASN36C, ASP108C, ASP10C, ASP122C, GLN103C, GLN37C, GLU105C, GLU25B, GLU42B, GLU58B, GLY47B, GLY7C, HIS109C, HIS26B, HIS69C, ILE44B, ILE46B, ILE71C, ILE72C, LEU106C, LEU107C, LEU126C, LEU30C, LEU32C, LEU49B, LEU53B, LYS24B, LYS35C, LYS4C, LYS6C, PHE120C, PHE12C, PRO20B, SER119C, SER33C, SER52B, SER70C, THR34C, THR43B, THR45B, THR48B, THR50B, TRP117C, VAL110C, VAL11C, VAL5C
• B-E: ALA51E, ALA62B, ALA62E, ALA63B, ALA63E, ALA68B, ALA68E, ALA98B, ALA98E, ARG57B, ARG57E, ARG65B, ARG65E, ASP100B, ASP100E, GLN103B, GLN103E, GLN90E, GLU58B, GLU58E, GLU66B, GLY99B, GLY99E, HIS55B, HIS55E, HIS69B, HIS69E, ILE104B, ILE104E, ILE54E, ILE59B, ILE59E, ILE64B, ILE64E, ILE94B, ILE94E, LEU101B, LEU101E, LEU102B, LEU102E, LEU32B, LEU39B, LEU95B, LEU95E, LYS61B, LYS61E, LYS96E, LYS97B, LYS97E, PHE60B, PHE60E, PRO56B, PRO56E, SER33B, SER52E, SER67B, SER67E, SER70B, SER93E, THR34B, VAL91E
• B-G: ASN86G, GLN90G, THR48B
• B-H: ALA124B, ALA124H, ARG121H, ASN86B, ASN86H, ASP122B, ASP122H, ASP81B, ASP88B, GLN83B, GLN90H, HIS123B, HIS123H, ILE94H, LEU125B, LEU125H, LEU126H, LYS89B, LYS89H, LYS96B, LYS96H, LYS97H, PHE118B, PHE118H, PHE120B, PHE120H, PRO84B, PRO84H, SER119B, SER119H, SER85B, SER93H, THR92H, VAL82B
• C-E: GLN103C, GLN103E, HIS69C, HIS69E
• C-F: ALA51C, ALA62C, ALA62F, ALA63C, ALA63F, ALA68C, ALA68F, ALA98C, ALA98F, ARG57C, ARG57F, ARG65C, ARG65F, ASP100C, ASP100F, GLN103C, GLN103F, GLU105F, GLU58C, GLU58F, GLU66F, GLY99C, GLY99F, HIS55C, HIS55F, HIS69F, ILE104C, ILE104F, ILE54C, ILE59C, ILE59F, ILE64C, ILE64F, ILE94C, ILE94F, LEU101C, LEU101F, LEU102C, LEU102F, LEU32F, LEU53C, LEU95C, LEU95F, LYS61C, LYS61F, LYS96C, LYS97C, LYS97F, PHE60C, PHE60F, PRO56C, PRO56F, SER52C, SER67F, SER70F, SER93C, THR34F, VAL91C
• C-G: ALA124C, ALA124G, ARG121C, ARG121G, ASN86C, ASN86G, ASP122C, ASP122G, ASP88C, ASP88G, GLN83C, GLN83G, GLN90G, HIS123C, HIS123G, ILE94G, LEU125C, LEU125G, LEU126C, LEU126G, LYS89C, LYS89G, LYS96G, LYS97G, PHE118C, PHE118G, PHE120C, PHE120G, PRO84C, PRO84G, SER119C, SER85C, SER85G, SER93G, THR92G, VAL82C, VAL91G
• D-E: ASN86D, ASN86E, GLN90D, GLN90E, LEU125E, LYS89D, LYS89E, LYS97E, PRO84D, SER85D, SER85E, SER93E
• D-H: ALA51H, ALA62D, ALA62H, ALA63D, ALA63H, ALA68D, ALA68H, ALA98D, ALA98H, ARG57D, ARG57H, ARG65D, ARG65H, ASP100D, ASP100H, GLN103D, GLN103H, GLU105D, GLU58D, GLU58H, GLU66D, GLY99D, GLY99H, HIS55D, HIS55H, HIS69D, ILE104D, ILE104H, ILE54H, ILE59D, ILE59H, ILE64D, ILE64H, ILE94D, ILE94H, LEU101D, LEU101H, LEU102D, LEU102H, LEU32D, LEU95D, LEU95H, LYS61D, LYS61H, LYS96H, LYS97D, LYS97H, PHE60D, PHE60H, PRO56D, PRO56H, SER52H, SER67D, SER70D, SER93H, THR34D, VAL91H
• E-F: ALA51F, ALA62F, ALA8E, ARG121E, ARG40F, ARG57F, ARG65F, ARG9E, ASN36E, ASP108E, ASP10E, ASP122E, GLN103E, GLN37E, GLU105E, GLU25F, GLU42F, GLU58F, GLY47F, GLY7E, HIS109E, HIS26F, HIS69E, ILE44F, ILE46F, ILE54F, ILE71E, ILE72E, LEU106E, LEU107E, LEU126E, LEU27F, LEU30E, LEU32E, LEU49F, LEU53F, LYS24F, LYS35E, LYS4E, LYS61F, LYS6E, PHE120E, SER119E, SER33E, SER52F, SER70E, THR34E, THR43F, THR45F, THR48F, THR50F, VAL110E, VAL11E, VAL5E
• G-H: ALA51G, ALA8H, ARG121H, ARG57G, ARG65G, ARG9H, ASN36H, ASP108H, ASP10H, ASP122H, GLN37H, GLU105H, GLU13H, GLU25G, GLU42G, GLU58G, GLY47G, GLY7H, HIS109H, HIS26G, HIS69H, ILE44G, ILE46G, ILE71H, ILE72H, LEU106H, LEU107H, LEU126H, LEU32H, LEU49G, LEU53G, LYS24G, LYS35H, LYS4H, LYS61G, LYS6H, PHE120H, PRO20G, SER119H, SER33H, SER52G, SER70H, THR34H, THR43G, THR45G, THR48G, THR50G, VAL110H, VAL11H, VAL5H