2QIY

yeast deubiquitinase ubp3 and bre5 cofactor complex

• Total interactions analyzed: 6
• Total true interactions: 4
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 73
  • Norm. En. per Res.: -5.6391
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-C	-77.8901	-25.5851	-308.182	-411.6572	73	14	8	11195	2	12	10
A-B	-110.1274	-109.124	-357.965	-577.2163	126	25	3	14665	6	29	22
C-B	0.0	0.0	-18.7037	-18.7037	16	0	1	680	0	0	0
B-D	-58.2763	-22.5868	-272.241	-353.1042	70	13	6	9771	0	11	8

Interface residues

• A-C: ALA102A, ALA11A, ALA215C, ALA218C, ALA219C, ALA220C, ARG19A, ARG21A, ARG224C, ARG77A, ASN143A, ASN15A, ASN211C, ASN228C, ASP51A, ASP52A, ASP84A, ASP87A, GLN14A, GLN223C, GLN6A, GLU105A, GLU18A, GLU214C, GLU216C, GLU226C, GLY104A, GLY110A, ILE210C, ILE86A, LEU13A, LEU206C, LEU208C, LEU227C, LEU54A, LEU79A, LEU81A, LEU83A, LYS115A, LYS230C, LYS50A, LYS80A, LYS82A, MET106A, MET20A, MET229C, PHE107A, PHE10A, PHE116A, PHE140A, PHE209C, PHE217C, PRO112A, PRO207C, SER142A, SER221C, SER78A, THR103A, THR109A, THR111A, THR212C, THR213C, THR22A, THR85A, TRP108A, TYR114A, TYR16A, TYR17A, TYR225C, VAL113A, VAL222C, VAL53A, VAL76A
• A-B: ALA102A, ALA102B, ALA32A, ALA32B, ALA35A, ALA35B, ARG139A, ARG139B, ASN135A, ASN135B, ASN143A, ASN143B, ASP136A, ASP136B, ASP52A, ASP52B, ASP84A, ASP84B, ASP87A, ASP87B, CYS117A, CYS117B, CYS9A, GLN118A, GLN118B, GLN6A, GLN6B, GLN89A, GLN89B, GLU105A, GLU105B, GLU36A, GLU36B, GLY104A, GLY104B, GLY61A, GLY61B, GLY92A, GLY92B, HIS39A, HIS39B, HIS93A, HIS93B, HIS95A, HIS95B, ILE100A, ILE100B, ILE121A, ILE121B, ILE133A, ILE133B, ILE137A, ILE137B, ILE138A, ILE138B, ILE141A, ILE141B, ILE65A, ILE65B, ILE86A, ILE86B, ILE98A, ILE98B, LEU122A, LEU122B, LEU123A, LEU123B, LEU37A, LEU37B, LEU94A, LEU94B, LEU99A, LEU99B, LYS115A, LYS115B, LYS58A, LYS58B, LYS82A, MET101A, MET101B, PHE116A, PHE116B, PHE120A, PHE120B, PHE140A, PHE140B, PHE145B, PHE88A, PHE88B, SER142A, SER142B, SER144B, SER97A, SER97B, THR103A, THR103B, THR119A, THR119B, THR134A, THR134B, THR34A, THR34B, THR38A, THR38B, THR56A, THR56B, THR60A, THR60B, THR85A, THR85B, THR91A, THR91B, TYR114A, TYR31A, TYR31B, TYR90A, TYR90B, VAL113A, VAL53A, VAL53B, VAL57A, VAL57B, VAL59A, VAL59B, VAL5A, VAL5B
• C-B: ALA218C, ALA220C, ARG139B, ARG224C, ASN143B, ASN228C, GLN223C, GLU226C, LEU206C, MET229C, PHE145B, PHE217C, SER144B, SER221C, TYR225C, VAL222C
• B-D: ALA102B, ALA11B, ALA215D, ALA218D, ALA219D, ALA220D, ARG19B, ARG21B, ARG224D, ARG77B, ASN143B, ASN15B, ASN211D, ASN228D, ASP51B, ASP52B, ASP84B, GLN14B, GLN223D, GLN6B, GLU105B, GLU18B, GLU214D, GLU216D, GLU226D, GLY104B, GLY110B, ILE210D, ILE86B, LEU13B, LEU206D, LEU208D, LEU227D, LEU54B, LEU79B, LEU81B, LEU83B, LYS115B, LYS80B, LYS82B, MET106B, MET20B, PHE107B, PHE10B, PHE116B, PHE140B, PHE145B, PHE209D, PHE217D, PRO112B, PRO207D, SER142B, SER221D, SER78B, THR103B, THR109B, THR111B, THR212D, THR213D, THR22B, THR85B, TRP108B, TYR114B, TYR16B, TYR17B, TYR225D, VAL113B, VAL222D, VAL53B, VAL76B