2Q5E

crystal structure of human carboxy-terminal domain rna polymerase ii polypeptide a small phosphatase 2

• Total interactions analyzed: 28
• Total true interactions: 20
• Strongest Interaction:
  • Chains: A-F
  • Int. Res.: 64
  • Norm. En. per Res.: -4.0853
• Hub Node: A(4)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-C	-17.1933	0.0	-66.7637	-83.957	56	5	0	3328	0	11	3
A-E	0.0	0.0	-0.0199	-0.0199	6	0	0	9	0	0	3
A-F	-85.3851	-10.781	-165.291	-261.4571	64	17	3	6052	2	23	24
A-H	-14.6461	5.1125	-92.8686	-102.4022	66	4	3	4130	0	25	19
B-C	-17.7446	11.7266	-101.062	-107.08	63	7	3	4275	0	24	19
B-D	-76.188	-0.2627	-119.544	-195.9947	60	11	4	5158	2	25	26
B-G	0.0	0.0	-0.0004	-0.0004	2	0	0	1	0	2	4
B-H	-8.7429	0.0	-63.497	-72.2399	52	3	0	3361	0	11	3
C-D	0.0	1.1783	-0.0615	1.1168	4	0	0	23	0	4	3
C-E	-84.3305	-3.7019	-153.428	-241.4604	62	13	2	5937	2	25	22
C-F	0.0	10.5176	-4.9709	5.5467	21	0	0	567	0	10	13
C-H	0.0	19.8246	-81.856	-62.0314	48	2	2	3197	0	4	6
D-E	-7.4867	10.1728	-100.3	-97.6139	61	6	3	4225	0	23	19
D-F	0.0	13.1694	-90.8931	-77.7237	48	1	2	3311	0	4	6
D-G	-4.7419	0.0	-67.6837	-72.4256	52	4	0	3447	0	11	5
D-H	0.0	14.9707	-6.9047	8.066	22	0	0	702	0	10	14
E-F	0.0	0.0	-50.3711	-50.3711	41	2	0	2594	0	9	2
F-G	-11.7143	12.8942	-94.1613	-92.9814	59	3	4	4061	0	24	19
F-H	0.0	0.0	-0.2551	-0.2551	10	0	0	76	0	4	2
G-H	-72.8507	-3.6715	-150.319	-226.8413	61	11	1	5937	2	24	22

Interface residues

• A-C: ALA123C, ALA221A, ALA230A, ALA270A, ARG143A, ARG269A, ASN218A, ASN247A, ASP124C, ASP217A, ASP239A, ASP242A, CYS198A, GLN137C, GLN234A, GLU130C, GLU132C, GLU228A, GLU244A, GLY133C, HIS136C, HIS195A, HIS226A, ILE120C, ILE126C, ILE129C, ILE131C, ILE224A, ILE251A, LEU176C, LEU248A, LEU265A, LEU268A, LYS118C, PHE117C, PHE125C, PHE225A, PHE237A, PRO119C, PRO128C, PRO220A, PRO227A, PRO232A, SER116C, SER219A, SER222A, SER235A, THR134C, THR135C, TRP236A, TYR139C, TYR223A, VAL127C, VAL200A, VAL231A, VAL233A
• A-E: ARG211A, ARG211E, ASP260A, ASP260E, THR263A, THR263E
• A-F: ALA164A, ALA167F, ALA170F, ALA185F, ARG179F, ARG184F, ARG186F, ARG189A, ARG189F, ARG205A, ARG205F, ARG208F, ASP171F, ASP175F, ASP178F, ASP202A, ASP98F, CYS159F, CYS180F, CYS192A, CYS192F, CYS198A, CYS89F, GLN196A, GLU190A, GLU190F, GLU93F, GLU96F, GLU97F, GLY181F, GLY197A, HIS195A, HIS226A, ILE224A, LEU161F, LEU166A, LEU166F, LEU187F, LEU210A, LEU90A, LEU90F, LEU91F, LYS168F, PHE162F, PHE183F, PHE188A, PHE188F, PHE194A, PHE225A, PRO172F, PRO92F, SER165F, SER191A, SER191F, SER204A, THR163F, THR174F, THR95F, TYR199A, VAL160F, VAL182F, VAL193A, VAL200A, VAL94F
• A-H: ALA164A, ALA221A, ALA221H, ALA230H, ARG143A, ARG189A, ARG205H, ARG211H, ARG269H, ASN218A, ASN229H, ASP109A, ASP202H, ASP209H, ASP238A, ASP239A, ASP260H, CYS198A, CYS89H, GLN137A, GLN196A, GLN196H, GLN234A, GLU110A, GLU132A, GLU190H, GLU228H, GLY197A, GLY266H, HIS114A, HIS136A, HIS195H, HIS226H, ILE120A, ILE131A, ILE224H, LEU210H, LEU265H, LEU90H, LYS118A, PHE117A, PHE194A, PHE194H, PHE225H, PHE237A, PRO119A, PRO220A, PRO227H, SER115A, SER116A, SER204H, SER219A, SER235A, THR111A, THR134A, THR135A, THR263H, TRP236A, TYR139A, TYR199A, TYR223H, TYR262H, VAL193H, VAL200H, VAL233A, VAL261H
• B-C: ALA164B, ALA221B, ALA230C, ARG143B, ARG189B, ARG205C, ARG211C, ARG269C, ASN218B, ASN229C, ASP109B, ASP202C, ASP209C, ASP238B, ASP239B, ASP260C, CYS198B, GLN137B, GLN196B, GLN196C, GLN234B, GLU110B, GLU132B, GLU228C, GLY197B, GLY197C, GLY266C, HIS114B, HIS136B, HIS195C, HIS226C, ILE120B, ILE131B, ILE224C, LEU210C, LEU265C, LEU90C, LYS118B, PHE117B, PHE194B, PHE194C, PHE225C, PHE237B, PRO119B, PRO220B, PRO227C, SER115B, SER116B, SER204C, SER219B, SER235B, THR134B, THR135B, THR263C, TRP236B, TYR139B, TYR199B, TYR223C, TYR262C, VAL193C, VAL200C, VAL233B, VAL261C
• B-D: ALA167D, ALA170D, ALA185D, ARG179D, ARG184D, ARG186D, ARG189B, ARG189D, ARG205B, ARG208D, ASP171D, ASP175D, ASP178D, ASP202B, ASP98D, CYS159D, CYS180D, CYS192B, CYS192D, CYS198B, GLN196B, GLU190B, GLU190D, GLU93D, GLU96D, GLU97D, GLY181D, GLY197B, HIS195B, HIS226B, ILE224B, LEU161D, LEU166B, LEU166D, LEU187D, LEU206D, LEU90B, LEU90D, LEU91D, LYS168D, PHE162D, PHE183D, PHE188D, PHE194B, PHE225B, PRO172D, PRO92D, SER165D, SER191B, SER191D, SER204B, THR163D, THR174D, THR95D, TYR199B, VAL160D, VAL182D, VAL193B, VAL200B, VAL94D
• B-G: ARG211B, THR263G
• B-H: ALA123H, ALA221B, ALA230B, ARG143B, ARG269B, ASN218B, ASP124H, ASP217B, ASP239B, CYS198B, GLN137H, GLN234B, GLU130H, GLU132H, GLU228B, GLU244B, GLY133H, HIS136H, HIS195B, HIS226B, ILE120H, ILE126H, ILE129H, ILE131H, ILE224B, ILE251B, LEU176H, LEU248B, LEU265B, LEU268B, LYS118H, PHE117H, PHE125H, PHE225B, PHE237B, PRO119H, PRO128H, PRO220B, PRO227B, PRO232B, SER116H, SER219B, SER222B, SER235B, THR134H, THR135H, TYR139H, TYR223B, VAL127H, VAL200B, VAL231B, VAL233B
• C-D: GLU190C, GLU190D, LEU90C, LEU90D
• C-E: ALA164E, ALA167C, ALA170C, ALA185C, ARG179C, ARG184C, ARG186C, ARG189C, ARG189E, ARG205E, ASP171C, ASP175C, ASP178C, ASP202E, ASP98C, CYS159C, CYS180C, CYS192C, CYS192E, CYS198E, CYS89E, GLN196E, GLU190C, GLU190E, GLU93C, GLU96C, GLU97C, GLY181C, GLY197E, HIS195E, HIS226E, ILE224E, LEU161C, LEU166C, LEU166E, LEU187C, LEU90C, LEU90E, LEU91C, LYS168C, PHE162C, PHE162E, PHE183C, PHE188C, PHE188E, PHE194E, PHE225E, PRO172C, PRO92C, SER165C, SER191C, SER191E, SER204E, THR163C, THR174C, THR95C, TYR199E, VAL160C, VAL182C, VAL193E, VAL200E, VAL94C
• C-F: ALA167C, ALA167F, ASP171C, ASP171F, GLU130C, GLU130F, GLU132C, GLU132F, GLU190C, GLU190F, GLY133C, GLY133F, LEU166C, LEU166F, LYS168C, LYS168F, PRO172C, PRO172F, THR134C, THR134F, TYR169F
• C-H: ARG189C, ARG189H, CYS198C, CYS198H, GLN137C, GLN137H, GLN196C, GLN196H, GLU132C, GLU132H, GLU190C, GLU190H, GLY197C, GLY197H, HIS136C, HIS136H, HIS195C, HIS195H, ILE120C, ILE129C, ILE129H, ILE131C, ILE131H, ILE224C, ILE224H, LEU166C, LEU166H, LYS118C, LYS118H, LYS168H, PHE117C, PHE117H, PHE194C, PHE194H, PRO119C, PRO119H, SER116C, SER116H, THR134C, THR134H, TYR139C, TYR139H, TYR199C, TYR199H, VAL138C, VAL138H, VAL193C, VAL193H
• D-E: ALA221E, ARG189E, ARG205D, ARG211D, ASN218E, ASN229D, ASP109E, ASP209D, ASP238E, ASP239E, ASP260D, CYS198E, GLN137E, GLN196D, GLN196E, GLN234E, GLU110E, GLU132E, GLU190D, GLU228D, GLY197D, GLY197E, GLY266D, HIS114E, HIS136E, HIS195D, HIS195E, HIS226D, ILE120E, ILE131E, ILE224D, LEU210D, LEU265D, LEU90D, LYS118E, PHE117E, PHE194D, PHE194E, PHE225D, PHE237E, PRO119E, PRO220E, PRO227D, SER115E, SER116E, SER204D, SER219E, SER235E, SER264D, THR111E, THR134E, THR135E, THR263D, TRP236E, TYR199E, TYR223D, TYR262D, VAL193D, VAL200D, VAL233E, VAL261D
• D-F: ALA221D, ARG189D, ARG189F, CYS198D, CYS198F, GLN137D, GLN137F, GLN196D, GLN196F, GLU132D, GLU132F, GLU190D, GLU190F, GLY197D, GLY197F, HIS136D, HIS136F, HIS195D, HIS195F, ILE129D, ILE129F, ILE131D, ILE131F, ILE224D, ILE224F, LEU166D, LEU166F, LYS118D, LYS118F, LYS168F, PHE117D, PHE117F, PHE194D, PHE194F, PRO119D, PRO119F, SER116D, SER116F, THR134D, THR134F, TYR139D, TYR139F, TYR199D, TYR199F, VAL138D, VAL138F, VAL193D, VAL193F
• D-G: ALA123D, ALA221G, ALA230G, ARG143G, ARG269G, ASN218G, ASN247G, ASP124D, ASP217G, CYS198G, GLN137D, GLN196G, GLN234G, GLU130D, GLU132D, GLU228G, GLU244G, GLY133D, HIS136D, HIS195G, HIS226G, ILE120D, ILE126D, ILE129D, ILE131D, ILE224G, ILE251G, LEU176D, LEU265G, LEU268G, LYS118D, PHE117D, PHE125D, PHE225G, PHE237G, PRO119D, PRO128D, PRO220G, PRO227G, PRO232G, SER219G, SER222G, SER235G, THR134D, THR135D, TYR139D, TYR223G, VAL127D, VAL138D, VAL200G, VAL231G, VAL233G
• D-H: ALA167D, ALA167H, ASP171D, ASP171H, GLU130D, GLU130H, GLU132D, GLU132H, GLU190D, GLU190H, GLY133D, GLY133H, LEU166D, LEU166H, LYS168D, LYS168H, PRO172D, PRO172H, THR134D, THR134H, TYR169D, TYR169H
• E-F: ALA221E, ALA230E, ARG143E, ASN218E, ASP239E, CYS198E, GLN137F, GLN234E, GLU130F, GLU132F, GLU228E, GLU244E, GLY133F, HIS136F, HIS195E, HIS226E, ILE120F, ILE126F, ILE129F, ILE131F, ILE224E, LEU265E, LYS118F, PHE117F, PHE225E, PHE237E, PRO119F, PRO128F, PRO220E, PRO227E, PRO232E, SER219E, SER222E, SER235E, THR134F, THR135F, TYR139F, TYR223E, VAL200E, VAL231E, VAL233E
• F-G: ALA221G, ARG143G, ARG189G, ARG205F, ARG211F, ASN218G, ASN229F, ASP109G, ASP202F, ASP209F, ASP238G, ASP260F, CYS198G, CYS89F, GLN137G, GLN196F, GLN196G, GLN234G, GLU110G, GLU132G, GLU228F, GLY197F, GLY197G, GLY266F, HIS114G, HIS136G, HIS195F, HIS226F, ILE120G, ILE131G, ILE224F, LEU210F, LEU265F, LEU90F, LYS118G, PHE117G, PHE194F, PHE194G, PHE225F, PHE237G, PRO119G, PRO220G, PRO227F, SER115G, SER116G, SER204F, SER219G, SER235G, THR134G, THR135G, THR263F, TRP236G, TYR199G, TYR223F, TYR262F, VAL193F, VAL200F, VAL233G, VAL261F
• F-H: CYS89F, CYS89H, GLU190F, GLU190H, GLU93F, LEU90F, LEU91F, LEU91H, PRO92F, PRO92H
• G-H: ALA164G, ALA167H, ALA170H, ALA185H, ARG179H, ARG184H, ARG186H, ARG189G, ARG189H, ARG205G, ASP171H, ASP175H, ASP178H, ASP202G, CYS159H, CYS180H, CYS192G, CYS192H, CYS198G, CYS89G, CYS89H, GLN196G, GLU190G, GLU190H, GLU93H, GLU96H, GLU97H, GLY181H, GLY197G, HIS195G, HIS226G, ILE224G, LEU161H, LEU166G, LEU166H, LEU187H, LEU90G, LEU90H, LEU91H, LYS168H, PHE162G, PHE162H, PHE183H, PHE188G, PHE188H, PHE194G, PHE225G, PRO172H, PRO92H, SER165H, SER191G, SER191H, SER204G, THR163H, THR174H, THR95H, TYR199G, VAL160H, VAL182H, VAL193G, VAL200G