2PM6

crystal structure of yeast sec13/31 edge element of the copii vesicular coat, native version

• Total interactions analyzed: 6
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 219
  • Norm. En. per Res.: -4.4999
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-79.6473	-10.1422	-561.606	-651.3955	188	38	26	23680	0	39	42
A-C	-124.8956	-19.1011	-841.484	-985.4807	219	81	29	34953	5	50	42
C-D	-122.5475	-25.586	-567.535	-715.6684	185	36	26	24011	1	39	38

Interface residues

• A-B: ALA100B, ALA145B, ALA15B, ALA178B, ALA25B, ALA260B, ALA270B, ALA292B, ALA373A, ALA383A, ALA384A, ALA387A, ALA5B, ALA738A, ALA743A, ALA7B, ARG208B, ARG219B, ARG23B, ARG259B, ARG58B, ARG739A, ASN103B, ASN149B, ASN267B, ASN276B, ASN284B, ASN406A, ASN663A, ASN6B, ASN708A, ASN9B, ASP122B, ASP14B, ASP179B, ASP18B, ASP205B, ASP209B, ASP255B, ASP275B, ASP398A, ASP60B, ASP662A, CYS27B, GLN106B, GLN227B, GLN394A, GLU10B, GLU283B, GLU286B, GLU290B, GLU379A, GLU39B, GLU41B, GLU656A, GLU668A, GLU705A, GLU732A, GLU736A, GLY147B, GLY177B, GLY21B, GLY266B, GLY273B, GLY274B, GLY287B, GLY378A, GLY389A, GLY390A, GLY399A, GLY401A, GLY40B, GLY411A, GLY745A, HIS110B, HIS13B, HIS385A, HIS43B, HIS63B, HIS670A, HIS8B, ILE12B, ILE146B, ILE395A, ILE404A, ILE409A, ILE4B, ILE666A, ILE742A, LEU11B, LEU17B, LEU217B, LEU218B, LEU24B, LEU257B, LEU264B, LEU269B, LEU271B, LEU280B, LEU285B, LEU392A, LEU412A, LEU659A, LEU709A, LEU741A, LYS22B, LYS277B, LYS282B, LYS288B, LYS34B, LYS391A, LYS400A, LYS408A, LYS65B, LYS660A, LYS661A, LYS664A, LYS737A, PHE36B, PHE388A, PHE716A, PRO214B, PRO291B, PRO374A, PRO380A, PRO382A, PRO397A, PRO407A, PRO55B, PRO64B, SER101B, SER120B, SER121B, SER261B, SER263B, SER265B, SER272B, SER28B, SER29B, SER381A, SER403A, SER410A, SER671A, SER712A, SER744A, THR215B, THR26B, THR279B, THR375A, THR396A, THR405A, THR42B, THR665A, THR710A, THR711A, THR713A, THR735A, TRP206B, TRP258B, TRP262B, TRP281B, TRP376A, TRP386A, TRP57B, TRP61B, TYR19B, TYR20B, TYR221B, TYR377A, TYR667A, TYR75B, VAL102B, VAL105B, VAL148B, VAL16B, VAL216B, VAL225B, VAL256B, VAL268B, VAL278B, VAL2B, VAL38B, VAL393A, VAL3B, VAL402A, VAL56B, VAL59B, VAL740A
• A-C: ALA467A, ALA526A, ALA526C, ALA539A, ALA539C, ALA543A, ALA543C, ALA558A, ALA558C, ALA561A, ALA561C, ALA599A, ALA599C, ARG550A, ARG571A, ARG571C, ARG579A, ARG579C, ARG621A, ARG621C, ASN497A, ASN497C, ASN509A, ASN517A, ASN517C, ASN522A, ASN522C, ASN529A, ASN529C, ASN533A, ASN547A, ASN547C, ASN548A, ASN548C, ASN557A, ASN557C, ASN587A, ASN587C, ASN602A, ASN602C, ASN625C, ASP469A, ASP469C, ASP503A, ASP503C, ASP534A, ASP545A, ASP545C, ASP582A, ASP582C, ASP583A, ASP583C, ASP589A, ASP589C, GLN493C, GLN499A, GLN499C, GLN512A, GLN512C, GLN592A, GLN592C, GLN601A, GLN601C, GLU495A, GLU495C, GLU501A, GLU501C, GLU511A, GLU511C, GLU532A, GLU532C, GLU538A, GLU538C, GLU549A, GLU549C, GLU553A, GLU553C, GLU580A, GLU580C, GLU586A, GLU586C, GLY502A, GLY502C, GLY508A, GLY508C, GLY521A, GLY521C, GLY564A, GLY564C, ILE494C, ILE510A, ILE510C, ILE514A, ILE514C, ILE523A, ILE523C, ILE542A, ILE542C, ILE572A, ILE572C, ILE576A, ILE576C, ILE596A, ILE596C, ILE600A, ILE600C, LEU506A, LEU506C, LEU518A, LEU518C, LEU531A, LEU531C, LEU535A, LEU535C, LEU536A, LEU536C, LEU544A, LEU544C, LEU551A, LEU551C, LEU569A, LEU569C, LEU573A, LEU573C, LEU584A, LEU584C, LEU588A, LEU588C, LEU603A, LEU603C, LYS516A, LYS516C, LYS524A, LYS528A, LYS552A, LYS552C, LYS556A, LYS556C, LYS562A, LYS562C, LYS566A, LYS566C, LYS578A, LYS578C, LYS594A, LYS594C, LYS598A, LYS598C, MET537A, MET537C, MET540A, MET540C, PHE468A, PHE468C, PHE498A, PHE498C, PHE504A, PHE504C, PHE560A, PHE560C, PHE595A, PHE595C, PRO500A, PRO500C, SER505A, SER505C, SER507A, SER507C, SER515A, SER515C, SER520A, SER520C, SER525A, SER530A, SER530C, SER546A, SER546C, SER554A, SER554C, SER565A, SER565C, SER567A, SER567C, SER568A, SER568C, SER570A, SER570C, SER575A, SER575C, SER577A, SER577C, SER591A, SER591C, SER597A, SER597C, THR496A, THR496C, THR513A, THR513C, TYR559A, TYR559C, TYR563A, TYR563C, TYR574A, TYR574C, VAL519A, VAL519C, VAL527A, VAL527C, VAL541A, VAL541C, VAL555A, VAL555C, VAL581A, VAL581C, VAL585A, VAL585C, VAL590A, VAL590C
• C-D: ALA100D, ALA145D, ALA15D, ALA178D, ALA25D, ALA260D, ALA270D, ALA292D, ALA373C, ALA383C, ALA384C, ALA387C, ALA5D, ALA669C, ALA738C, ALA743C, ALA7D, ARG208D, ARG219D, ARG23D, ARG259D, ARG58D, ARG739C, ASN103D, ASN149D, ASN267D, ASN276D, ASN284D, ASN406C, ASN663C, ASN6D, ASN708C, ASN9D, ASP14D, ASP179D, ASP18D, ASP205D, ASP209D, ASP255D, ASP275D, ASP398C, ASP60D, ASP662C, CYS27D, GLN106D, GLN227D, GLN394C, GLU10D, GLU283D, GLU286D, GLU290D, GLU294D, GLU379C, GLU39D, GLU41D, GLU656C, GLU668C, GLU705C, GLU736C, GLY147D, GLY177D, GLY21D, GLY266D, GLY273D, GLY274D, GLY287D, GLY293D, GLY378C, GLY389C, GLY390C, GLY399C, GLY401C, GLY40D, GLY411C, GLY745C, HIS110D, HIS13D, HIS296D, HIS385C, HIS43D, HIS63D, HIS670C, HIS8D, ILE12D, ILE146D, ILE395C, ILE404C, ILE409C, ILE4D, ILE666C, ILE742C, LEU11D, LEU17D, LEU217D, LEU218D, LEU24D, LEU257D, LEU264D, LEU269D, LEU271D, LEU280D, LEU285D, LEU392C, LEU412C, LEU659C, LEU709C, LEU741C, LYS22D, LYS277D, LYS282D, LYS288D, LYS391C, LYS400C, LYS408C, LYS65D, LYS660C, LYS661C, LYS664C, LYS737C, PHE36D, PHE388C, PHE716C, PRO214D, PRO291D, PRO374C, PRO380C, PRO382C, PRO397C, PRO407C, PRO55D, PRO64D, SER101D, SER120D, SER121D, SER261D, SER263D, SER265D, SER272D, SER28D, SER29D, SER381C, SER403C, SER410C, SER671C, SER712C, SER744C, THR215D, THR26D, THR279D, THR375C, THR396C, THR405C, THR42D, THR665C, THR710C, THR711C, THR713C, THR735C, TRP206D, TRP258D, TRP262D, TRP281D, TRP376C, TRP386C, TRP57D, TYR19D, TYR20D, TYR221D, TYR377C, TYR667C, TYR75D, VAL102D, VAL148D, VAL16D, VAL256D, VAL268D, VAL278D, VAL295D, VAL2D, VAL38D, VAL393C, VAL3D, VAL402C, VAL59D, VAL740C