2PKD

crystal structure of cd84: insite into slam family function

• Total interactions analyzed: 15
• Total true interactions: 5
• Strongest Interaction:
  • Chains: D-F
  • Int. Res.: 75
  • Norm. En. per Res.: -3.8064
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-38.7233	-35.2721	-206.41	-280.4054	74	11	1	8475	0	18	22
A-C	-16.0663	21.0097	-141.575	-136.6316	76	6	3	6079	0	4	8
B-D	-20.8667	17.0299	-122.195	-126.0318	80	7	3	6709	0	4	9
C-E	-44.3552	-33.3523	-177.603	-255.3105	71	15	1	7458	0	18	21
D-F	-44.1027	-43.0615	-198.316	-285.4801	75	17	1	8432	0	18	22

Interface residues

• A-B: ALA33A, ALA33B, ALA41A, ALA41B, ALA89A, ALA89B, ALA95A, ARG103A, ARG59A, ARG59B, ASN60A, ASN60B, ASN92A, ASN92B, ASP90A, ASP90B, ASP96A, ASP96B, GLN94A, GLN94B, HIS58A, HIS58B, ILE31A, ILE31B, ILE32A, ILE32B, ILE91A, ILE91B, LYS30A, LYS30B, LYS37A, LYS37B, LYS88A, LYS88B, PRO97A, PRO97B, SER36A, SER36B, SER39A, SER39B, THR100A, THR100B, THR101A, THR101B, THR35A, THR35B, THR38A, THR38B, THR44A, THR44B, THR55A, THR55B, THR57A, THR57B, THR93A, THR93B, THR99A, THR99B, TRP34A, TRP34B, TYR42A, TYR42B, TYR61A, TYR61B, TYR62A, TYR62B, TYR98A, TYR98B, VAL40A, VAL40B, VAL43A, VAL43B, VAL56A, VAL56B
• A-C: ARG110A, ARG110C, ARG111A, ARG111C, ARG27A, ASN10A, ASN10C, ASN22A, ASN22C, ASN71A, ASN71C, ASN73A, ASN73C, GLN107A, GLN107C, GLN24A, GLN24C, GLU15A, GLU15C, GLU25A, GLU25C, GLU5A, GLU5C, GLY11A, GLY11C, GLY69A, GLY69C, ILE108A, ILE108C, ILE12A, ILE12C, ILE23A, ILE23C, ILE6A, ILE6C, LEU106A, LEU106C, LEU13C, LEU68A, LEU68C, LEU74A, LEU74C, LEU79A, LEU79C, LYS102A, LYS102C, PHE19A, PHE19C, PHE7A, PHE7C, PRO20A, PRO20C, PRO26A, PRO70A, PRO70C, SER16A, SER16C, THR100A, THR100C, THR18A, THR18C, THR8A, THR8C, TYR104A, TYR104C, TYR109A, TYR109C, TYR98C, VAL17A, VAL17C, VAL21A, VAL21C, VAL75A, VAL75C, VAL9A, VAL9C
• B-D: ARG110B, ARG110D, ARG111B, ARG111D, ASN10B, ASN10D, ASN22B, ASN22D, ASN71B, ASN71D, ASN73B, ASN73D, GLN107B, GLN107D, GLN24B, GLN24D, GLU15B, GLU15D, GLU25B, GLU25D, GLU5B, GLU5D, GLY11B, GLY11D, GLY69B, GLY69D, ILE108B, ILE108D, ILE12B, ILE12D, ILE23B, ILE23D, ILE6B, ILE6D, ILE91B, ILE91D, LEU106B, LEU106D, LEU13B, LEU68B, LEU68D, LEU74B, LEU74D, LEU79B, LEU79D, LYS102B, LYS102D, MET81B, PHE19B, PHE19D, PHE7B, PHE7D, PRO20B, PRO20D, PRO70B, PRO70D, PRO97B, PRO97D, SER16B, SER16D, SER4B, THR100B, THR100D, THR18B, THR18D, THR8B, THR8D, THR93B, TYR104B, TYR104D, TYR109B, TYR109D, VAL17B, VAL17D, VAL21B, VAL21D, VAL75B, VAL75D, VAL9B, VAL9D
• C-E: ALA33C, ALA33E, ALA41C, ALA41E, ALA89C, ALA89E, ARG103C, ARG59C, ARG59E, ASN60C, ASN60E, ASN92C, ASN92E, ASP90C, ASP90E, ASP96C, ASP96E, HIS58C, HIS58E, ILE31C, ILE31E, ILE32C, ILE32E, ILE91C, ILE91E, LYS30C, LYS30E, LYS37C, LYS37E, LYS88C, LYS88E, PRO97C, PRO97E, SER36C, SER36E, SER39C, SER39E, THR100C, THR100E, THR101C, THR101E, THR35C, THR35E, THR38C, THR38E, THR44C, THR44E, THR55C, THR55E, THR57C, THR57E, THR93C, THR93E, THR99C, THR99E, TRP34C, TRP34E, TYR42C, TYR42E, TYR61C, TYR61E, TYR62C, TYR62E, TYR98C, TYR98E, VAL40C, VAL40E, VAL43C, VAL43E, VAL56C, VAL56E
• D-F: ALA33D, ALA33F, ALA41D, ALA41F, ALA89D, ALA89F, ALA95D, ALA95F, ARG103D, ARG103F, ARG59D, ARG59F, ASN60D, ASN60F, ASN92D, ASN92F, ASP90D, ASP90F, ASP96D, ASP96F, GLN94F, HIS58D, HIS58F, ILE31D, ILE31F, ILE32D, ILE32F, ILE91D, ILE91F, LYS30D, LYS30F, LYS37D, LYS37F, LYS88D, LYS88F, PRO97D, PRO97F, SER36D, SER36F, SER39D, SER39F, THR100D, THR100F, THR101D, THR101F, THR35D, THR35F, THR38D, THR38F, THR44D, THR44F, THR55D, THR55F, THR57D, THR57F, THR93D, THR93F, THR99D, THR99F, TRP34D, TRP34F, TYR42D, TYR42F, TYR61D, TYR61F, TYR62D, TYR62F, TYR98D, TYR98F, VAL40D, VAL40F, VAL43D, VAL43F, VAL56D, VAL56F