2PD1

crystal structure of ne2512 protein of unknown function from nitrosomonas europaea

• Total interactions analyzed: 6
• Total true interactions: 6
• Strongest Interaction:
  • Chains: B-D
  • Int. Res.: 126
  • Norm. En. per Res.: -5.9271
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	0.0	0.0	-7.5558	-7.5558	15	0	0	433	0	5	4
A-C	-211.2534	-13.5708	-502.726	-727.5502	125	24	40	18695	8	12	20
A-D	0.0	0.0	-4.2646	-4.2646	13	0	0	412	0	2	2
B-C	-5.4572	-11.2388	-71.5253	-88.2212	62	2	5	4047	0	9	9
B-D	-200.7669	-61.3952	-484.65	-746.8121	126	16	40	18185	7	12	21
C-D	0.0	0.0	-0.4182	-0.4182	8	0	0	92	0	2	5

Interface residues

• A-B: ARG62B, ARG9A, GLN63B, GLU17A, GLU59B, GLU92B, GLY46A, LEU4B, LYS44A, LYS90B, PHE45A, PRO47A, SER48A, THR49A, VAL91B
• A-C: ALA100A, ALA100C, ALA18A, ALA18C, ALA21A, ALA21C, ALA25A, ALA25C, ALA27A, ALA27C, ALA31A, ALA31C, ALA33A, ALA33C, ALA39A, ALA39C, ALA42A, ALA42C, ALA55A, ALA55C, ALA5A, ALA5C, ALA95A, ALA95C, ALA96A, ALA96C, ARG62C, ARG9A, ARG9C, ASN32A, ASN32C, ASN87A, ASN87C, ASP22A, ASP22C, ASP54A, ASP54C, GLU17A, GLU17C, GLU34A, GLU34C, GLU89A, GLU89C, GLU92A, GLU92C, GLY-1A, GLY101A, GLY101C, GLY36A, GLY36C, GLY46A, GLY46C, GLY51A, GLY51C, HIS0A, ILE70A, ILE70C, LEU10A, LEU10C, LEU20A, LEU20C, LEU24A, LEU24C, LEU28A, LEU28C, LEU30A, LEU30C, LEU43A, LEU43C, LEU4A, LEU4C, LEU6A, LEU6C, LEU93A, LEU93C, LEU94A, LEU94C, LEU98A, LEU98C, LYS3A, LYS3C, LYS44A, LYS44C, LYS90A, LYS90C, LYS97A, LYS97C, PHE23A, PHE23C, PHE41A, PHE41C, PHE45A, PHE45C, PHE50A, PHE50C, PHE53A, PHE53C, PHE56A, PHE56C, PHE7A, PHE7C, PRO29A, PRO29C, PRO99A, PRO99C, SER26A, SER26C, SER35A, SER35C, THR2A, THR2C, THR37A, THR37C, THR38A, THR38C, THR49A, THR49C, TRP40A, TRP40C, VAL52A, VAL52C, VAL8A, VAL8C, VAL91A, VAL91C
• A-D: ALA18A, ALA21A, GLU17A, GLY46A, GLY46D, LYS44A, LYS44D, PHE45A, PHE45D, PHE50A, PRO47A, PRO47D, SER48D
• B-C: ALA71B, ALA71C, ALA72B, ALA72C, ALA73B, ALA73C, ALA76B, ALA76C, ALA78B, ALA78C, ALA79B, ALA79C, ARG62B, ARG62C, ARG9B, ASN67B, ASN67C, ASN77B, ASN77C, ASN87B, ASN87C, GLN63B, GLN63C, GLN69B, GLU11B, GLU11C, GLU59B, GLU59C, GLU89B, GLU89C, GLY68B, GLY68C, HIS65B, HIS65C, ILE70B, ILE70C, ILE88B, ILE88C, LEU66B, LEU66C, LEU6B, LEU6C, LEU74B, LEU74C, LEU82B, LYS13B, LYS13C, LYS90B, LYS90C, PHE7B, PRO85B, PRO85C, PRO86B, PRO86C, SER83B, SER83C, SER84B, SER84C, THR80B, THR80C, VAL8B, VAL8C
• B-D: ALA100B, ALA100D, ALA18B, ALA18D, ALA21B, ALA21D, ALA25B, ALA25D, ALA27B, ALA27D, ALA31B, ALA31D, ALA33B, ALA33D, ALA39B, ALA39D, ALA42B, ALA42D, ALA55B, ALA55D, ALA5B, ALA5D, ALA95B, ALA95D, ALA96B, ALA96D, ARG62B, ARG62D, ARG9B, ARG9D, ASN32B, ASN32D, ASN87B, ASN87D, ASP22B, ASP22D, ASP54B, ASP54D, GLU17B, GLU17D, GLU34B, GLU34D, GLU89B, GLU89D, GLU92B, GLU92D, GLY101D, GLY36B, GLY36D, GLY46B, GLY46D, GLY51B, GLY51D, ILE70B, ILE70D, ILE88B, ILE88D, LEU10B, LEU10D, LEU20B, LEU20D, LEU24B, LEU24D, LEU28B, LEU28D, LEU30B, LEU30D, LEU43B, LEU43D, LEU4B, LEU4D, LEU6B, LEU6D, LEU93B, LEU93D, LEU94B, LEU94D, LEU98B, LEU98D, LYS3B, LYS3D, LYS44B, LYS44D, LYS90B, LYS90D, LYS97B, LYS97D, PHE23B, PHE23D, PHE41B, PHE41D, PHE45B, PHE45D, PHE50B, PHE50D, PHE53B, PHE53D, PHE56B, PHE56D, PHE7B, PHE7D, PRO29B, PRO29D, PRO47D, PRO99B, PRO99D, SER26B, SER26D, SER35B, SER35D, THR2B, THR2D, THR37B, THR37D, THR38B, THR38D, THR49B, THR49D, TRP40B, TRP40D, VAL52B, VAL52D, VAL8B, VAL8D, VAL91B, VAL91D
• C-D: ARG9D, GLU92C, GLY46D, LEU94C, LYS90C, PHE45D, PRO47D, SER48D