2ORB

the structure of the anti-c-myc antibody 9e10 fab fragment

• Total interactions analyzed: 6
• Total true interactions: 4
• Strongest Interaction:
  • Chains: L-H
  • Int. Res.: 192
  • Norm. En. per Res.: -2.5502
• Hub Node: L(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
L-H	-16.3696	-11.7302	-461.54	-489.6398	192	16	11	18802	0	20	15
L-I	0.0	0.0	-0.1814	-0.1814	5	0	0	36	0	2	1
H-I	-21.0039	4.6421	-29.4364	-45.7982	33	9	0	1810	0	1	8
M-I	-21.9445	-12.0177	-403.119	-437.0812	178	18	9	17009	0	19	14

Interface residues

• L-H: ALA100H, ALA125H, ALA130L, ALA168H, ALA49H, ALA50L, ALA93H, ARG211L, ARG213H, ARG38H, ARG44H, ARG94H, ARG95H, ASN137L, ASN138L, ASN161L, ASN212L, ASN34L, ASN53L, ASP101H, ASP165L, ASP167L, ASP170L, ASP1L, ASP214H, ASP27L, ASP42H, ASP61H, CYS134L, CYS140H, CYS88L, CYS92H, GLN105H, GLN124L, GLN171H, GLN37L, GLN38L, GLN39H, GLN42L, GLN6L, GLN89L, GLN90L, GLU123L, GLU1H, GLU46H, GLU6H, GLU97H, GLY100L, GLY101L, GLY104H, GLY106H, GLY129L, GLY139H, GLY144H, GLY158L, GLY162H, GLY33H, GLY41L, GLY55L, GLY57L, GLY99L, HIS164H, HIS58H, ILE117L, ILE210H, ILE2L, ILE48L, ILE51H, ILE51L, LEU124H, LEU125L, LEU136L, LEU138H, LEU141H, LEU160L, LEU170H, LEU174H, LEU177H, LEU179L, LEU181L, LEU45H, LEU46L, LEU47L, LEU4H, LEU4L, LYS103L, LYS143H, LYS169L, LYS208H, LYS209H, LYS39L, LYS43H, LYS45L, LYS64H, LYS92L, MET100H, MET135H, MET175L, MET33L, MET34H, MET85L, MET89H, PHE118L, PHE135L, PHE139L, PHE166H, PHE209L, PHE32L, PHE36L, PHE87L, PHE98L, PRO119L, PRO120L, PRO123H, PRO126H, PRO167H, PRO40L, PRO43L, PRO44L, PRO60H, PRO95L, SER100H, SER116L, SER120H, SER121L, SER122L, SER127L, SER131L, SER162L, SER168L, SER172H, SER174L, SER176L, SER177L, SER178H, SER179H, SER180H, SER31L, SER35H, SER56L, SER62H, SER96H, THR114L, THR126L, THR137H, THR164L, THR165H, THR172L, THR176H, THR178L, THR180L, THR182H, THR50H, THR91L, THR97L, TRP103H, TRP154H, TRP163L, TRP188H, TRP35L, TRP36H, TRP47H, TRP96L, TYR100H, TYR102H, TYR122H, TYR173L, TYR175H, TYR186L, TYR49L, TYR56H, TYR59H, TYR86L, TYR90H, TYR91H, VAL115L, VAL121H, VAL132L, VAL133L, VAL136H, VAL142H, VAL159L, VAL163H, VAL169H, VAL181H, VAL211H, VAL27L, VAL2H, VAL37H, VAL3L, VAL48H, VAL94L
• L-I: ARG53I, PHE32L, THR55I, TRP96L, TYR56I
• H-I: ARG53H, ARG53I, ARG71I, ARG94I, ARG95H, ARG95I, GLU97H, GLY33H, GLY33I, GLY52H, GLY52I, GLY54I, HIS31H, HIS31I, ILE51H, MET34H, PHE29I, SER100H, SER30H, SER30I, SER52H, SER52I, SER96H, SER96I, THR28I, THR50H, THR55H, THR55I, TYR100H, TYR32H, TYR32I, TYR56H, TYR56I
• M-I: ALA100I, ALA125I, ALA130M, ALA168I, ALA49I, ALA50M, ALA93I, ARG211M, ARG213I, ARG38I, ARG44I, ARG94I, ARG95I, ASN137M, ASN138M, ASN161M, ASN34M, ASP101I, ASP165M, ASP167M, ASP170M, ASP1M, ASP214I, ASP42I, ASP61I, CYS134M, CYS140I, CYS88M, CYS92I, GLN105I, GLN124M, GLN171I, GLN37M, GLN38M, GLN39I, GLN42M, GLN89M, GLN90M, GLU123M, GLU213M, GLU46I, GLU6I, GLU93M, GLY100M, GLY101M, GLY104I, GLY106I, GLY129M, GLY139I, GLY144I, GLY158M, GLY162I, GLY33I, GLY41M, GLY55M, GLY57M, GLY99M, HIS164I, HIS58I, ILE117M, ILE210I, ILE48M, ILE51I, LEU124I, LEU125M, LEU136M, LEU138I, LEU141I, LEU160M, LEU170I, LEU174I, LEU177I, LEU179M, LEU181M, LEU45I, LEU46M, LEU47M, LEU4I, LEU4M, LYS103M, LYS143I, LYS169M, LYS208I, LYS209I, LYS39M, LYS43I, LYS45M, LYS64I, MET100I, MET135I, MET175M, MET33M, MET34I, MET85M, MET89I, PHE118M, PHE135M, PHE139M, PHE166I, PHE209M, PHE36M, PHE87M, PHE98M, PRO119M, PRO120M, PRO123I, PRO126I, PRO167I, PRO40M, PRO43M, PRO44M, PRO60I, PRO95M, SER116M, SER120I, SER121M, SER122M, SER127M, SER131M, SER161I, SER162M, SER168M, SER172I, SER174M, SER176M, SER177M, SER178I, SER179I, SER180I, SER35I, SER56M, SER96I, THR114M, THR126M, THR137I, THR164M, THR165I, THR172M, THR176I, THR178M, THR180M, THR182I, THR50I, THR91M, THR97M, TRP103I, TRP154I, TRP163M, TRP188I, TRP36I, TRP47I, TRP96M, TYR102I, TYR122I, TYR173M, TYR175I, TYR186M, TYR49M, TYR56I, TYR59I, TYR86M, TYR90I, TYR91I, VAL115M, VAL121I, VAL132M, VAL133M, VAL136I, VAL142I, VAL159M, VAL163I, VAL169I, VAL181I, VAL211I, VAL37I, VAL3M, VAL48I, VAL94M