2NYT

the apobec2 crystal structure and functional implications for aid

• Total interactions analyzed: 6
• Total true interactions: 3
• Strongest Interaction:
  • Chains: A-C
  • Int. Res.: 64
  • Norm. En. per Res.: -3.9899
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-90.6314	18.6323	-309.109	-381.108	123	29	3	11874	0	16	18
A-C	-24.0779	-73.5319	-157.741	-255.3508	64	16	0	5797	13	32	30
C-D	-63.3831	24.8295	-219.408	-257.9616	105	21	4	9231	0	13	16

Interface residues

• A-B: ALA102A, ALA102B, ALA110A, ALA110B, ALA114A, ALA114B, ALA76A, ALA76B, ALA85A, ALA85B, ALA95A, ALA95B, ALA96A, ALA96B, ARG65A, ARG87A, ARG87B, ASN105A, ASN105B, ASN190A, ASN190B, ASP112A, ASP112B, ASP92A, ASP92B, CYS71A, GLN189A, GLN189B, GLN194A, GLN194B, GLN77B, GLN82A, GLN82B, GLN84A, GLN84B, GLU193A, GLU193B, GLU195A, GLU195B, GLU196A, GLU196B, GLU198B, GLU75A, GLU75B, GLU91A, GLU91B, GLU93A, GLU93B, GLY197B, GLY35B, GLY37A, GLY37B, GLY38A, GLY38B, GLY39A, GLY39B, GLY78A, GLY78B, GLY80A, GLY80B, GLY81A, GLY81B, GLY88A, GLY88B, HIS94A, HIS94B, ILE107A, ILE107B, ILE41A, ILE41B, LEU108A, LEU108B, LEU115A, LEU115B, LEU70A, LEU70B, LEU90A, LEU90B, LYS67A, LYS79A, LYS79B, MET40A, MET40B, PHE103A, PHE103B, PHE104A, PHE111A, PHE111B, PHE191A, PHE191B, PHE69A, PHE69B, PRO109A, PRO109B, PRO113A, PRO113B, SER199B, SER36A, SER36B, SER86A, SER86B, THR106A, THR106B, THR68A, THR68B, TYR117A, TYR117B, TYR186A, TYR186B, TYR72A, TYR72B, TYR89A, TYR89B, VAL192A, VAL192B, VAL42A, VAL42B, VAL73A, VAL73B, VAL74A, VAL74B, VAL83A, VAL83B
• A-C: ALA129A, ALA129C, ALA164C, ARG153A, ARG153C, ARG57A, ARG57C, ASN211A, ASN211C, ASN58A, ASN58C, ASN66A, ASN66C, ASP207A, ASP207C, GLN163A, GLN163C, GLU158A, GLU158C, GLU159A, GLU159C, GLU161A, GLU161C, GLU210A, GLU210C, GLU60A, GLU60C, GLY64A, GLY64C, ILE162A, ILE162C, LEU154A, LEU154C, LYS218A, LYS218C, LYS53A, LYS53C, LYS67A, LYS67C, MET156A, MET156C, PHE155A, PHE155C, PHE54A, PHE54C, PRO160A, PRO160C, SER124C, SER125A, SER125C, SER62A, SER62C, SER63A, SER63C, TRP157A, TRP157C, TYR214A, TYR214C, TYR215A, TYR215C, TYR61A, TYR61C, VAL59A, VAL59C
• C-D: ALA102C, ALA102D, ALA110C, ALA110D, ALA114C, ALA114D, ALA76C, ALA76D, ALA85C, ALA85D, ALA95C, ALA95D, ALA96C, ALA96D, ARG65C, ARG87C, ARG87D, ASN105C, ASN105D, ASN190C, ASN190D, ASP112C, ASP112D, ASP92C, ASP92D, CYS71C, CYS71D, GLN189C, GLN189D, GLN194C, GLN77D, GLN82C, GLN82D, GLN84C, GLN84D, GLU193C, GLU193D, GLU198C, GLU75C, GLU75D, GLU91C, GLU91D, GLU93C, GLU93D, GLY197C, GLY78C, GLY78D, GLY80C, GLY80D, GLY81C, GLY81D, GLY88C, GLY88D, HIS94C, HIS94D, ILE107C, ILE107D, ILE41C, ILE41D, LEU108C, LEU108D, LEU115C, LEU115D, LEU70C, LEU70D, LEU90C, LEU90D, LYS67D, LYS79C, MET40C, MET40D, PHE103C, PHE103D, PHE111C, PHE111D, PHE191C, PHE191D, PHE69C, PHE69D, PRO109C, PRO109D, PRO113D, SER86C, SER86D, THR106C, THR106D, THR68C, THR68D, TYR117C, TYR117D, TYR186C, TYR186D, TYR72C, TYR72D, TYR89C, TYR89D, VAL192C, VAL42C, VAL42D, VAL73C, VAL73D, VAL74C, VAL74D, VAL83C, VAL83D