2NY7

hiv-1 gp120 envelope glycoprotein complexed with the broadly neutralizing cd4-binding-site antibody b12

• Total interactions analyzed: 3
• Total true interactions: 2
• Strongest Interaction:
  • Chains: G-H
  • Int. Res.: 101
  • Norm. En. per Res.: -3.0569
• Hub Node: H(1)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
G-H	-41.1839	-9.7289	-257.832	-308.7448	101	11	2	9532	0	19	19
H-L	-55.8794	-31.4241	198.276	110.9725	204	18	13	21137	2	36	27

Interface residues

• G-H: ALA281G, ALA75H, ARG28H, ARG419G, ARG456G, ARG469G, ARG476G, ARG480G, ARG94H, ASN100H, ASN280G, ASN31H, ASN386G, ASN478G, ASN52H, ASN54H, ASN56H, ASN76H, ASP100H, ASP279G, ASP368G, ASP457G, ASP474G, ASP477G, CYS385G, CYS418G, GLN100H, GLN258G, GLN363G, GLN64H, GLU370G, GLU58H, GLY26H, GLY329G, GLY366G, GLY367G, GLY431G, GLY458G, GLY459G, GLY471G, GLY472G, GLY473G, GLY55H, GLY96H, HIS330G, HIS374G, ILE108G, ILE284G, ILE371G, ILE420G, ILE467G, LEU416G, LEU453G, LEU454G, LYS282G, LYS421G, LYS429G, LYS432G, LYS57H, MET433G, MET475G, PHE29H, PHE32H, PHE383G, PHE468G, PHE59H, PRO100H, PRO369G, PRO417G, PRO470G, PRO52H, PRO97H, SER100H, SER256G, SER257G, SER30H, SER364G, SER365G, SER387G, SER74H, SER99H, THR283G, THR373G, THR388G, THR455G, THR73H, TRP100H, TRP375G, TRP427G, TRP50H, TYR100H, TYR27H, TYR384G, TYR435G, TYR53H, TYR98H, VAL255G, VAL33H, VAL372G, VAL430G, VAL95H
• H-L: ALA125H, ALA130L, ALA138H, ALA139H, ALA176H, ALA225H, ALA34L, ALA43L, ALA55L, ALA61H, ALA93H, ALA93L, ARG142L, ARG211L, ARG24L, ARG31L, ARG32L, ARG38H, ARG44H, ARG45L, ARG94H, ASN100H, ASN137L, ASN138L, ASN158L, ASN210L, ASN53L, ASP100H, ASP101H, ASP122L, ASP146H, ASP167L, ASP170L, CYS134L, CYS142H, CYS214L, CYS230H, CYS88L, CYS92H, GLN100H, GLN100L, GLN124L, GLN160L, GLN166L, GLN179H, GLN37L, GLN39H, GLN42L, GLN43H, GLN6H, GLN6L, GLN89L, GLU123L, GLU161L, GLU165L, GLU1L, GLU213L, GLU226H, GLU46H, GLU58H, GLY101L, GLY104H, GLY106H, GLY135H, GLY141H, GLY157L, GLY169H, GLY183H, GLY212L, GLY41L, GLY42H, GLY49H, GLY50L, GLY92L, GLY96H, GLY99L, HIS172H, HIS35H, HIS38L, HIS49L, ILE117L, ILE2L, ILE48L, LEU124H, LEU125L, LEU135L, LEU136L, LEU140H, LEU143H, LEU175L, LEU178H, LEU179L, LEU181L, LEU184H, LEU187H, LEU46L, LEU4H, LEU4L, LEU85L, LYS105H, LYS126L, LYS129H, LYS145H, LYS169L, LYS207L, LYS221H, LYS222H, LYS228H, LYS39L, LYS62H, MET100H, MET48H, PHE116L, PHE118L, PHE122H, PHE139L, PHE174H, PHE209L, PHE45H, PHE59H, PHE98L, PRO100H, PRO119L, PRO120L, PRO123H, PRO126H, PRO175H, PRO40L, PRO44L, PRO97H, SER100H, SER114L, SER120H, SER121L, SER127H, SER127L, SER128H, SER130H, SER131L, SER134H, SER159L, SER162L, SER168L, SER174L, SER176L, SER177L, SER180H, SER182H, SER186H, SER188H, SER189H, SER208L, SER229H, SER30L, SER56L, SER60H, SER94L, SER95L, THR129L, THR133H, THR137H, THR164L, THR172L, THR173H, THR178L, THR180L, THR192H, THR5L, THR97L, TRP103H, TRP35L, TRP36H, TRP47H, TRP50H, TYR100H, TYR173L, TYR185H, TYR36L, TYR86L, TYR87L, TYR91H, TYR91L, TYR96L, VAL102H, VAL115L, VAL121H, VAL132L, VAL133L, VAL144H, VAL163L, VAL171H, VAL177H, VAL190H, VAL191H, VAL193H, VAL33H, VAL33L, VAL37H, VAL3L, VAL47L, VAL51L, VAL89H, VAL90L, VAL95H