2NX3
structural and mechanistic changes along an engineered path from metallo to non-metallo kdo8p synthase
Total interactions analyzed 66
Total true interactions 24
Strongest Interaction Chains G-H
Int. Res. 150
Norm. En. per Res. -4.0561
Hub Node A(5)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -119.02 -33.9262 -443.256 -596.2021 151 14 7 16993 10 39 55
A-C 0.0 0.0 -42.2344 -42.2344 20 1 0 1364 0 0 0
A-D -56.5903 -16.9632 -362.976 -436.5295 132 9 20 15537 8 28 26
A-G -7.0072 -7.4087 -64.3828 -78.7988 44 2 1 2418 2 16 21
A-H 0.0 -7.2534 -12.5331 -19.7865 12 0 0 565 0 13 7
B-C -51.442 -28.0323 -362.913 -442.3873 127 16 21 15678 8 27 28
B-D 0.0 0.0 -44.5415 -44.5415 20 2 0 1365 0 0 0
B-G -13.7609 -32.4984 -28.165 -74.4243 37 1 0 1386 2 19 19
C-D -124.3016 -33.745 -435.665 -593.7117 153 19 8 16990 9 38 54
E-F -97.2431 -33.9987 -428.662 -559.9038 152 23 7 16867 11 38 53
E-G 0.0 0.0 -48.0424 -48.0424 18 0 0 1385 0 0 0
E-H -51.3709 -20.356 -356.606 -428.3329 131 13 22 15536 8 27 27
F-G -48.46 -6.9443 -340.385 -395.7893 133 13 21 15319 7 27 26
F-H 0.0 0.0 -44.6496 -44.6496 19 2 0 1394 0 0 0
G-H -137.5527 -34.5776 -436.28 -608.4103 150 14 8 16850 10 39 55
G-I 0.0 -5.9577 -12.5951 -18.5528 12 0 0 569 0 12 6
G-J -9.323 9.4956 -56.2698 -56.0972 43 1 1 2218 1 15 20
H-J -3.2637 -20.7368 -33.4107 -57.4112 36 1 0 1235 1 18 21
I-J -114.4979 -26.1622 -445.677 -586.3371 152 15 7 16993 9 38 52
I-K 0.0 0.0 -45.97 -45.97 20 1 0 1372 0 0 0
I-L -67.0715 -26.8714 -359.135 -453.0779 133 10 22 15544 8 28 28
J-K -39.6495 -17.7183 -347.323 -404.6908 130 19 23 15451 6 26 26
J-L 0.0 0.0 -45.4014 -45.4014 20 1 0 1397 0 0 0
K-L -107.375 -18.6229 -443.328 -569.326 153 19 8 17155 8 37 51