2NVT
rna polymerase ii elongation complex in 150 mm mg+2 with gmpcpp
Total interactions analyzed 78
Total true interactions 23
Strongest Interaction Chains B-C
Int. Res. 164
Norm. En. per Res. -4.0092
Hub Node B(8)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -378.4634 -219.7906 -2370.1 -2968.354 756 234 58 106209 20 260 244
A-C -18.2269 6.5043 -73.4631 -85.1857 56 3 0 3281 0 17 18
A-E -85.3989 -67.4603 -557.824 -710.6833 197 40 16 23439 5 76 58
A-F -40.5348 -7.2318 -464.004 -511.7705 166 19 13 20153 0 59 55
A-H -66.0837 0.754 -400.433 -465.7626 137 31 10 16951 3 36 36
A-I -105.7954 -49.1009 -410.462 -565.3583 142 25 9 16323 3 52 51
A-K -45.8091 -29.7223 -255.685 -331.2165 87 24 8 10261 3 20 21
B-C -70.6811 -99.4714 -487.353 -657.5055 164 35 5 17808 6 55 59
B-E 0.0 0.0 -0.0771 -0.0771 2 0 0 29 0 0 1
B-F 0.0 0.0 -8.2242 -8.2242 16 0 0 433 0 6 9
B-H 0.0 0.0 -0.2071 -0.2071 2 0 0 35 0 0 0
B-I -8.0951 -31.791 -289.24 -329.126 131 17 2 12597 2 46 47
B-J -49.0548 -17.5384 -385.619 -452.2122 138 45 7 18542 2 36 38
B-K -2.2763 -2.0168 -68.2874 -72.5805 54 4 0 3089 1 13 17
B-L -40.0575 -72.4683 -219.119 -331.6448 110 17 9 10911 3 46 45
C-H 0.0 -3.1825 -29.6037 -32.7862 22 1 1 1291 0 8 5
C-J -32.8582 -51.0513 -239.912 -323.8215 111 29 10 12115 6 39 26
C-K -37.5704 -44.8025 -461.418 -543.7909 147 40 15 22135 4 43 43
C-L -26.4919 -29.0296 -138.75 -194.2715 57 10 8 5434 6 23 15
E-F 0.0 -18.2019 -21.2991 -39.501 22 2 0 1072 0 5 5
H-K 0.0 0.0 -25.9416 -25.9416 25 3 0 1318 2 5 6
J-L 0.0 0.0 -2.1038 -2.1038 9 0 0 221 0 0 1
K-L 0.0 4.5794 -1.3866 3.1928 6 0 0 162 0 3 2