2NV1

structure of the synthase subunit pdx1 (yaad) of plp synthase from bacillus subtilis

• Total interactions analyzed: 15
• Total true interactions: 6
• Strongest Interaction:
  • Chains: E-F
  • Int. Res.: 83
  • Norm. En. per Res.: -5.2466
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-41.7006	-122.5295	-274.938	-439.168	86	8	16	11310	8	35	31
A-F	-50.7965	-134.5572	-262.723	-448.0768	86	6	16	11025	9	33	26
B-C	-42.9201	-116.8146	-258.316	-418.0507	84	5	16	10947	8	35	30
C-D	-46.8627	-119.4122	-263.354	-429.6289	84	5	16	11106	9	33	30
D-E	-42.815	-121.9081	-265.991	-430.7141	86	4	14	11246	9	35	31
E-F	-48.728	-119.9997	-266.743	-435.4707	83	7	16	11110	8	34	30

Interface residues

• A-B: ALA110B, ALA160A, ALA169A, ALA216A, ALA219A, ALA221A, ALA222A, ALA254A, ALA265A, ALA59B, ALA62B, ALA90B, ALA95B, ARG162A, ARG165A, ARG60B, ARG83B, ARG91B, ASN117B, ASN156A, ASN72B, ASP111B, ASP220A, ASP260A, ASP63B, GLN226A, GLU112B, GLU113B, GLU151A, GLU159A, GLU266A, GLU270A, GLU46B, GLU68B, GLU69B, GLU89B, GLU94B, GLY155A, GLY214A, GLY57B, GLY85B, GLY97B, HIS115B, HIS163A, HIS257A, HIS86B, ILE157A, ILE264A, ILE66B, ILE84B, ILE87B, LEU116B, LEU223A, LEU227A, LEU263A, LEU267A, LEU271A, LEU93B, LYS166A, LYS262A, LYS269A, MET224A, MET225A, MET61B, MET96B, PHE114B, PHE247A, PHE258A, PRO109B, PRO218A, PRO64B, SER268A, THR108B, THR154A, THR217A, THR259A, THR65B, TYR121B, TYR261A, VAL158A, VAL161A, VAL215A, VAL58B, VAL67B, VAL88B, VAL92B
• A-F: ALA110A, ALA160F, ALA169F, ALA216F, ALA219F, ALA221F, ALA222F, ALA254F, ALA265F, ALA59A, ALA62A, ALA90A, ALA95A, ARG162F, ARG165F, ARG60A, ARG83A, ARG91A, ASN117A, ASN156F, ASP111A, ASP220F, ASP260F, ASP63A, GLN226F, GLU112A, GLU113A, GLU151F, GLU159F, GLU266F, GLU270F, GLU46A, GLU68A, GLU69A, GLU89A, GLU94A, GLY155F, GLY214F, GLY56A, GLY57A, GLY85A, GLY97A, HIS115A, HIS163F, HIS257F, HIS86A, ILE157F, ILE264F, ILE66A, ILE84A, ILE87A, LEU116A, LEU223F, LEU227F, LEU263F, LEU267F, LEU271F, LEU93A, LYS166F, LYS262F, LYS269F, MET224F, MET225F, MET61A, MET71A, MET96A, PHE114A, PHE258F, PRO109A, PRO218F, PRO64A, SER268F, THR108A, THR154F, THR217F, THR259F, THR65A, TYR121A, TYR261F, VAL158F, VAL161F, VAL215F, VAL58A, VAL67A, VAL88A, VAL92A
• B-C: ALA110C, ALA160B, ALA169B, ALA216B, ALA219B, ALA221B, ALA222B, ALA254B, ALA265B, ALA59C, ALA62C, ALA90C, ALA95C, ARG162B, ARG165B, ARG60C, ARG83C, ARG91C, ASN117C, ASN156B, ASP111C, ASP220B, ASP260B, ASP63C, GLN226B, GLU112C, GLU113C, GLU151B, GLU159B, GLU266B, GLU270B, GLU68C, GLU69C, GLU89C, GLU94C, GLY155B, GLY214B, GLY228B, GLY57C, GLY85C, GLY97C, HIS115C, HIS163B, HIS257B, HIS86C, ILE157B, ILE264B, ILE66C, ILE84C, ILE87C, LEU116C, LEU223B, LEU227B, LEU263B, LEU267B, LEU93C, LYS166B, LYS262B, LYS269B, MET224B, MET225B, MET61C, MET96C, PHE114C, PHE247B, PHE258B, PRO109C, PRO218B, PRO64C, SER268B, THR108C, THR154B, THR217B, THR259B, THR65C, TYR121C, TYR261B, VAL158B, VAL161B, VAL215B, VAL58C, VAL67C, VAL88C, VAL92C
• C-D: ALA110D, ALA160C, ALA169C, ALA216C, ALA219C, ALA221C, ALA222C, ALA254C, ALA265C, ALA59D, ALA62D, ALA90D, ALA95D, ARG162C, ARG165C, ARG60D, ARG83D, ARG91D, ASN117D, ASN156C, ASP111D, ASP220C, ASP260C, ASP63D, GLN226C, GLU112D, GLU113D, GLU151C, GLU159C, GLU266C, GLU270C, GLU46D, GLU68D, GLU69D, GLU89D, GLU94D, GLY155C, GLY214C, GLY57D, GLY85D, GLY97D, HIS115D, HIS163C, HIS257C, HIS86D, ILE157C, ILE264C, ILE66D, ILE84D, ILE87D, LEU116D, LEU223C, LEU227C, LEU263C, LEU267C, LEU271C, LEU93D, LYS166C, LYS262C, LYS269C, MET224C, MET225C, MET61D, MET96D, PHE114D, PHE258C, PRO109D, PRO218C, PRO64D, SER268C, THR108D, THR154C, THR217C, THR259C, THR65D, TYR121D, TYR261C, VAL158C, VAL161C, VAL215C, VAL58D, VAL67D, VAL88D, VAL92D
• D-E: ALA110E, ALA160D, ALA169D, ALA216D, ALA219D, ALA221D, ALA222D, ALA254D, ALA265D, ALA59E, ALA62E, ALA90E, ALA95E, ARG162D, ARG165D, ARG60E, ARG83E, ARG91E, ASN117E, ASN156D, ASP111E, ASP220D, ASP260D, ASP63E, GLN226D, GLU112E, GLU113E, GLU151D, GLU159D, GLU266D, GLU270D, GLU46E, GLU68E, GLU69E, GLU89E, GLU94E, GLY155D, GLY214D, GLY272D, GLY57E, GLY85E, GLY97E, HIS115E, HIS163D, HIS257D, HIS86E, ILE157D, ILE264D, ILE66E, ILE84E, ILE87E, LEU116E, LEU223D, LEU227D, LEU263D, LEU267D, LEU271D, LEU93E, LYS166D, LYS262D, LYS269D, MET224D, MET225D, MET61E, MET71E, MET96E, PHE114E, PHE258D, PRO109E, PRO218D, PRO64E, SER268D, THR108E, THR154D, THR217D, THR259D, THR65E, TYR121E, TYR261D, VAL158D, VAL161D, VAL215D, VAL58E, VAL67E, VAL88E, VAL92E
• E-F: ALA110F, ALA160E, ALA169E, ALA216E, ALA219E, ALA221E, ALA222E, ALA254E, ALA265E, ALA59F, ALA62F, ALA90F, ALA95F, ARG162E, ARG165E, ARG60F, ARG83F, ARG91F, ASN117F, ASN156E, ASP111F, ASP220E, ASP260E, ASP63F, GLN226E, GLU112F, GLU113F, GLU151E, GLU159E, GLU266E, GLU270E, GLU68F, GLU69F, GLU89F, GLU94F, GLY155E, GLY214E, GLY57F, GLY85F, GLY97F, HIS115F, HIS163E, HIS257E, HIS86F, ILE157E, ILE264E, ILE66F, ILE84F, ILE87F, LEU116F, LEU223E, LEU227E, LEU263E, LEU267E, LEU93F, LYS166E, LYS262E, LYS269E, MET224E, MET225E, MET61F, MET96F, PHE114F, PHE247E, PHE258E, PRO109F, PRO218E, PRO64F, SER268E, THR108F, THR154E, THR217E, THR259E, THR65F, TYR121F, TYR261E, VAL158E, VAL161E, VAL215E, VAL58F, VAL67F, VAL88F, VAL92F