2JD8
crystal structure of the zn-soaked ferritin from the hyperthermophilic archaeal anaerobe pyrococcus furiosus
Total interactions analyzed 630
Total true interactions 105
Strongest Interaction Chains A-S
Int. Res. 125
Norm. En. per Res. -5.019
Hub Node 3(7)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
0-2 0.0 0.0 -0.7525 -0.7525 9 0 0 126 0 0 0
0-7 -7.2615 -18.3763 -99.046 -124.6838 50 0 4 4462 0 23 25
0-G 0.0 -17.5177 -67.7886 -85.3063 39 0 1 3015 2 17 11
0-H 0.0 -15.3559 -64.1817 -79.5376 37 1 1 2986 0 16 11
0-I -85.8713 -70.019 -417.875 -573.7653 125 21 14 16103 5 36 33
0-Z 0.0 -22.102 -104.713 -126.815 52 4 4 4555 1 21 24
1-5 0.0 -8.0274 -99.3701 -107.3975 51 0 4 4401 1 22 25
1-6 0.0 -10.2437 -103.968 -114.2117 53 3 4 4641 1 22 26
1-7 0.0 0.0 -0.6426 -0.6426 7 0 0 92 0 0 0
1-I 0.0 -16.3479 -59.7587 -76.1066 40 1 1 3071 0 18 11
1-J -92.1321 -62.3498 -428.211 -582.6929 130 25 14 16459 5 35 34
1-O -6.0903 -22.4538 -73.4492 -101.9933 41 3 1 3109 1 17 11
2-3 -5.4686 -16.9557 -114.147 -136.5713 52 5 4 4697 1 22 27
2-D 0.0 0.0 -0.0256 -0.0256 2 0 0 7 0 1 1
2-G -10.3042 -18.8126 -65.847 -94.9638 38 2 1 3002 2 16 11
2-H 0.0 -7.2678 -51.1335 -58.4013 35 1 1 2678 0 15 10
2-K -82.3305 -76.4381 -440.172 -598.9406 128 17 14 16406 6 35 36
2-Y -7.0505 -13.3224 -97.5065 -117.8794 50 4 4 4531 1 22 25
3-9 0.0 0.0 -0.7145 -0.7145 7 0 0 103 0 0 0
3-C 0.0 0.0 -0.0208 -0.0208 2 0 0 7 0 0 2
3-D -13.3813 68.0594 -62.4911 -7.8131 30 3 0 2394 0 27 34
3-K 0.0 -17.7315 -64.3384 -82.0699 37 0 1 2926 1 16 11
3-L -67.3799 -68.2487 -445.928 -581.5566 128 22 13 16510 6 33 35
3-Q -7.71 -28.0651 -69.9312 -105.7063 40 1 1 3097 2 17 11
3-Y 0.0 -20.4357 -99.3102 -119.7459 52 7 4 4691 1 21 25
4-8 0.0 -17.4954 -100.933 -118.4284 51 1 4 4417 1 21 25
4-9 0.0 -9.2657 -101.295 -110.5607 51 6 4 4437 1 23 25
4-M -58.8048 -54.6246 -440.751 -554.1804 129 23 14 16488 6 35 37
4-P 0.0 -19.423 -66.9428 -86.3658 39 0 1 3038 2 16 11
4-R -4.2028 -20.9115 -69.0585 -94.1728 36 3 1 3044 1 16 11
4-Z 0.0 0.0 -0.3307 -0.3307 8 0 0 84 0 0 0
5-6 0.0 -13.6662 -97.8392 -111.5054 51 5 4 4545 1 22 26
5-J -2.5945 -23.8083 -67.4636 -93.8664 37 1 1 2941 2 17 11
5-L -3.9126 -16.1308 -64.8186 -84.862 36 2 1 2841 2 16 11
5-N -102.5865 -80.4443 -429.188 -612.2189 128 21 13 16268 6 33 36
5-Y 0.0 0.0 -1.4243 -1.4243 12 0 0 172 0 0 0
6-8 0.0 0.0 -0.36 -0.36 7 0 0 81 0 0 0
6-M -12.0503 -16.1999 -66.4496 -94.6998 40 3 1 3119 1 17 11
6-N 0.0 -14.9747 -65.939 -80.9137 38 2 1 2997 1 16 11
6-O -111.67 -83.3306 -445.903 -640.9037 130 23 15 16551 5 34 33
7-I 0.0 -18.8003 -67.6093 -86.4096 38 1 1 2993 1 16 11
7-O -6.507 -17.8801 -58.3535 -82.7406 36 1 1 2855 1 18 10
7-P -80.5016 -67.7697 -421.058 -569.3293 131 25 14 16261 5 35 34
7-Z 0.0 -14.9379 -105.608 -120.5459 52 1 4 4383 1 23 26
8-9 0.0 -19.3795 -98.0183 -117.3978 53 1 4 4501 0 22 25
8-M 0.0 -22.6726 -67.1037 -89.7763 39 1 1 3146 2 17 11
8-N -5.6603 -22.3276 -64.2164 -92.2043 37 2 1 2891 2 16 11
8-Q -58.8305 -69.3607 -435.432 -563.6231 129 13 14 16144 6 35 34
9-K -3.4804 -19.1367 -65.9164 -88.5335 38 0 1 2932 2 16 11
9-Q 0.0 -11.5778 -57.8407 -69.4185 36 1 1 2819 1 16 11
9-R -70.2055 -67.7625 -433.457 -571.4251 128 17 13 16197 6 35 36
A-B 0.0 0.0 -0.3479 -0.3479 5 0 0 69 0 0 0
A-C -4.2162 -14.2007 -102.194 -120.6109 51 2 4 4435 1 21 25
A-D -3.5088 -14.1867 -102.602 -120.2975 52 0 4 4526 1 22 26
A-S -116.1414 -88.3424 -422.89 -627.3738 125 18 14 15976 6 34 34
A-U 0.0 -17.9228 -71.8647 -89.7875 41 4 1 3134 2 16 11
A-W 0.0 -9.7951 -57.4499 -67.245 40 3 1 2801 0 16 11
B-E 0.0 -12.1808 -104.941 -117.1218 51 1 4 4540 1 22 26
B-T -94.887 -80.3271 -435.423 -610.6371 129 21 14 16238 6 36 36
B-U -2.5002 -21.4753 -71.2118 -95.1873 41 2 1 3025 2 17 11
B-W 0.0 -18.0124 -61.2237 -79.2361 39 1 1 2864 2 16 11
C-D 0.0 -12.7479 -102.061 -114.8089 54 2 4 4697 1 22 25
C-G 0.0 12.4326 -2.4193 10.0133 12 0 0 208 0 13 9
C-U -105.5684 -72.5459 -423.824 -601.9383 129 18 14 16505 6 35 33
C-V -5.9765 -27.8685 -73.373 -107.2181 42 3 2 3210 2 16 11
C-Y -13.1771 -39.0835 -221.48 -273.7406 107 3 3 9170 10 86 85
D-F 0.0 0.0 -0.4649 -0.4649 7 0 0 108 0 0 0
D-S 0.0 -15.9877 -66.098 -82.0857 38 6 1 3013 2 16 11
D-V -77.611 -73.2636 -431.972 -582.8466 129 19 14 16295 6 33 33
D-Y 0.0 4.018 -10.8137 -6.7957 15 0 0 639 0 12 6
E-W -113.4721 -79.5983 -442.193 -635.2634 131 16 15 16459 6 34 38
E-X 0.0 -18.951 -76.9506 -95.9016 39 3 1 3217 2 17 11
F-S -7.6713 -22.012 -72.6597 -102.3431 37 5 1 3027 2 17 11
F-X -70.017 -75.047 -443.968 -589.032 129 12 13 16287 6 35 38
G-H 0.0 0.0 -0.1813 -0.1813 7 0 0 48 0 0 0
G-I 0.0 -16.0649 -101.52 -117.5849 53 2 4 4497 1 22 25
G-J 0.0 -16.0996 -101.467 -117.5666 52 2 4 4422 1 22 26
G-U 0.0 1.039 -0.1418 0.8972 6 0 0 59 0 3 4
G-Y -71.4402 -67.7908 -445.416 -584.647 127 16 14 16235 6 35 35
H-K -8.2627 -11.2989 -104.536 -124.0975 52 4 4 4600 1 22 24
H-R 0.0 -9.913 -107.342 -117.255 52 3 4 4635 1 22 26
H-Z -98.6152 -83.0167 -434.877 -616.5089 128 17 14 16198 6 36 35
I-J 0.0 -14.7939 -108.602 -123.3959 51 1 4 4812 1 22 26
I-O 0.0 0.0 -0.5173 -0.5173 7 0 0 105 0 0 0
J-L 0.0 0.0 -0.3755 -0.3755 8 0 0 65 0 0 0
J-Y -4.9728 -20.709 -68.3228 -94.0046 39 1 1 3020 2 16 11
K-Q 0.0 0.0 -0.3469 -0.3469 6 0 0 55 0 0 0
K-R -6.7768 -8.2544 -101.699 -116.7302 53 4 4 4563 1 22 26
L-N 0.0 -7.9487 -105.288 -113.2367 51 2 4 4547 1 22 26
L-Q 0.0 -17.6889 -108.772 -126.4609 52 3 4 4661 1 22 26
L-Y -11.5625 -12.945 -60.0884 -84.5959 41 1 1 2858 1 16 11
M-N 0.0 0.0 -1.0658 -1.0658 8 0 0 132 0 0 0
M-O 0.0 -12.8926 -106.444 -119.3366 53 0 4 4704 1 21 26
M-P -6.7417 -9.3414 -99.7592 -115.8423 53 4 4 4414 1 22 27
N-Q 0.0 -10.0456 -104.369 -114.4146 51 2 4 4507 1 22 25
O-P -9.1866 -12.4849 -96.4655 -118.1371 52 3 4 4359 1 21 26
P-R 0.0 0.0 -3.9962 -3.9962 9 0 0 214 0 0 0
P-Z -8.6457 -18.3771 -60.4532 -87.476 37 3 1 2905 1 16 11
R-Z 0.0 -16.7775 -73.6158 -90.3933 39 1 1 3185 2 16 11
S-W -7.123 -18.2459 -97.2617 -122.6306 51 1 4 4513 1 21 26
S-X 0.0 -16.455 -100.568 -117.023 52 3 4 4408 1 20 26
T-U 0.0 -8.084 -104.314 -112.398 52 0 4 4471 1 21 25
U-W 0.0 0.0 -2.0848 -2.0848 8 0 0 133 0 0 0
U-Y 0.0 0.0 -0.0169 -0.0169 3 0 0 7 0 6 3
W-X 0.0 -10.3987 -108.436 -118.8347 52 0 4 4743 1 22 26