2JD7
crystal structure of the fe-soaked ferritin from the hyperthermophilic archaeal anaerobe pyrococcus furiosus
Total interactions analyzed 630
Total true interactions 105
Strongest Interaction Chains A-S
Int. Res. 130
Norm. En. per Res. -4.9912
Hub Node 3(7)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
0-2 0.0 0.0 -1.6151 -1.6151 10 0 0 168 0 0 0
0-7 0.0 -9.1715 -103.108 -112.2794 52 3 4 4505 0 20 25
0-G -2.1537 -21.3037 -70.6007 -94.0581 38 0 1 3122 2 18 11
0-H 0.0 -14.5729 -65.6094 -80.1823 39 1 1 2956 0 16 11
0-I -90.1008 -62.2033 -410.99 -563.2941 126 22 14 15931 5 34 33
0-Z 0.0 -19.8537 -107.697 -127.5507 52 7 4 4624 0 21 25
1-5 0.0 -6.9117 -102.216 -109.1277 51 1 4 4480 0 21 26
1-6 0.0 -7.9088 -103.053 -110.9618 51 0 4 4523 1 21 26
1-7 0.0 0.0 -0.6967 -0.6967 7 0 0 88 0 0 0
1-I 0.0 -17.0547 -62.9629 -80.0176 40 1 1 3145 0 17 11
1-J -98.705 -60.8682 -435.873 -595.4462 129 24 15 16215 4 35 34
1-O -2.2053 -22.4961 -74.1622 -98.8636 42 2 1 3103 2 17 11
2-3 -7.0284 -17.7508 -109.109 -133.8882 52 4 4 4623 0 22 25
2-D 0.0 0.0 -0.0176 -0.0176 2 0 0 6 0 1 1
2-G -10.5373 -24.2126 -65.5514 -100.3014 38 1 1 3035 1 16 11
2-H 0.0 -7.2046 -52.4926 -59.6972 34 3 1 2774 0 16 10
2-K -89.2356 -72.8915 -430.002 -592.1292 128 18 14 16283 7 35 35
2-Y -7.5691 -11.8164 -98.6876 -118.0732 50 5 4 4557 1 21 25
3-9 0.0 0.0 -0.6939 -0.6939 7 0 0 91 0 0 0
3-C 0.0 0.0 -0.0104 -0.0104 2 0 0 7 0 0 2
3-D -10.6017 63.7379 -54.3456 -1.2094 30 3 0 2375 1 24 33
3-K 0.0 -16.0282 -69.1276 -85.1558 38 2 1 3062 1 16 11
3-L -47.9416 -73.9384 -442.024 -563.904 128 21 13 16417 6 36 33
3-Q -8.302 -22.6335 -72.4621 -103.3976 42 1 1 3197 2 17 11
3-Y 0.0 -20.0408 -101.385 -121.4258 50 3 4 4623 1 21 26
4-8 0.0 -17.1576 -97.064 -114.2216 49 2 4 4353 1 21 24
4-9 0.0 -16.8344 -102.366 -119.2004 51 6 4 4502 1 21 25
4-M -90.715 -68.3031 -427.278 -586.2961 128 26 14 16424 6 35 36
4-P 0.0 -13.1737 -64.8863 -78.06 37 4 1 3071 0 16 11
4-R -2.8518 -21.14 -69.3486 -93.3405 38 5 1 3140 1 17 11
4-Z 0.0 0.0 -0.3769 -0.3769 10 0 0 88 0 0 0
5-6 -7.7161 -8.9744 -107.73 -124.4205 53 4 4 4652 1 21 26
5-J 0.0 -22.6928 -68.2679 -90.9607 37 1 1 3002 1 17 11
5-L -11.9352 -16.0046 -66.0204 -93.9602 37 3 1 2867 1 16 11
5-N -91.4526 -81.192 -412.391 -585.0356 128 23 13 15998 6 33 36
5-Y 0.0 0.0 -1.4198 -1.4198 12 0 0 163 0 0 0
6-8 0.0 0.0 -0.5156 -0.5156 7 0 0 106 0 0 0
6-M -10.5409 -13.6975 -63.8369 -88.0753 37 1 1 2971 1 16 11
6-N 0.0 -15.3142 -67.0274 -82.3416 40 1 1 3006 1 16 11
6-O -100.9955 -80.8046 -436.373 -618.1731 129 28 15 16488 5 34 36
7-I 0.0 -21.1607 -68.1063 -89.267 38 2 1 3054 2 16 11
7-O 0.0 -20.6124 -64.6695 -85.2819 38 0 1 2991 2 18 10
7-P -82.9033 -48.6709 -398.957 -530.5312 129 22 13 15759 3 36 33
7-Z 0.0 -19.5477 -109.631 -129.1787 52 5 4 4492 1 23 25
8-9 0.0 -20.2398 -107.964 -128.2038 53 1 4 4771 1 21 25
8-M 0.0 -26.2855 -70.7017 -96.9871 41 1 1 3272 2 18 11
8-N -9.5287 -20.5415 -63.7824 -93.8526 37 1 1 2848 2 16 11
8-Q -87.9708 -71.3067 -430.408 -589.6855 128 16 14 16107 6 35 34
9-K -4.3631 -22.2795 -64.7132 -91.3557 37 0 1 2890 2 16 11
9-Q -2.2476 -11.5814 -59.5351 -73.3641 35 1 1 2925 0 16 11
9-R -94.5431 -80.0758 -424.261 -598.88 129 17 13 16059 6 34 33
A-B 0.0 0.0 -0.3128 -0.3128 7 0 0 61 0 0 0
A-C -4.3657 -15.2308 -102.604 -122.2005 51 1 4 4474 1 20 25
A-D 0.0 -15.4249 -106.925 -122.3499 52 2 4 4590 1 21 26
A-S -133.2273 -87.6378 -427.994 -648.8591 130 16 13 16006 5 34 35
A-U 0.0 -16.958 -71.446 -88.4039 41 3 1 3137 2 16 11
A-W -4.9667 -16.5222 -62.3978 -83.8867 41 3 1 2850 2 16 11
B-E 0.0 -10.9854 -105.83 -116.8154 51 3 4 4569 1 21 27
B-T -98.5232 -73.6612 -417.919 -590.1034 129 21 14 15941 5 35 35
B-U 0.0 -18.8855 -66.3857 -85.2712 40 0 1 2954 2 16 11
B-W 0.0 -16.8157 -61.1877 -78.0034 36 2 1 2860 2 16 11
C-D 0.0 -14.2278 -102.571 -116.7988 53 2 4 4699 1 21 25
C-G 0.0 18.0468 -4.1633 13.8835 13 0 0 240 0 13 9
C-U -85.9392 -68.67 -410.211 -564.8201 129 26 14 16406 6 35 36
C-V -3.8367 -26.1111 -76.7672 -106.715 42 3 2 3335 2 17 11
C-Y -14.8443 -52.0182 -225.634 -292.4965 106 5 3 8951 11 88 86
D-F 0.0 0.0 -0.662 -0.662 6 0 0 112 0 0 0
D-S 0.0 -16.9445 -63.6203 -80.5648 38 5 1 3074 2 16 11
D-V -91.337 -69.1598 -421.655 -582.1518 130 14 14 16212 6 34 36
D-Y 0.0 3.4805 -11.262 -7.7815 16 2 0 655 0 12 7
E-W -103.9019 -72.5221 -435.934 -612.358 130 18 14 16250 6 33 37
E-X 0.0 -23.2659 -74.55 -97.8159 39 3 1 3218 2 16 11
F-S -9.8718 -20.9706 -72.2617 -103.1041 38 4 1 3054 2 16 11
F-X -73.7311 -70.1188 -430.385 -574.2349 129 18 14 16130 6 35 36
G-H 0.0 0.0 -0.2595 -0.2595 6 0 0 51 0 0 0
G-I -3.1618 -16.6979 -106.187 -126.0467 53 1 4 4628 2 21 25
G-J 0.0 -9.5769 -100.714 -110.2909 52 4 4 4535 1 22 26
G-U 0.0 0.0 -0.1204 -0.1204 6 0 0 57 0 3 4
G-Y -59.4154 -67.9798 -435.401 -562.7962 127 17 14 16160 5 35 35
H-K -7.188 -10.095 -102.814 -120.097 54 6 4 4644 1 22 25
H-R 0.0 -8.1607 -105.86 -114.0207 52 4 4 4676 1 22 27
H-Z -56.9406 -63.574 -434.536 -555.0506 126 14 14 16149 6 35 34
I-J 0.0 -12.8173 -107.802 -120.6193 51 2 4 4791 1 22 26
I-O 0.0 0.0 -0.4567 -0.4567 6 0 0 96 0 0 0
J-L 0.0 0.0 -0.8229 -0.8229 8 0 0 94 0 0 0
J-Y -10.0435 -21.0295 -68.1946 -99.2676 38 1 1 2949 2 16 11
K-Q 0.0 0.0 -0.5153 -0.5153 7 0 0 76 0 0 0
K-R -6.1017 -6.5805 -103.537 -116.2192 51 3 4 4568 1 21 26
L-N 0.0 -5.0753 -104.586 -109.6613 52 5 4 4616 1 22 25
L-Q 0.0 -10.1097 -103.277 -113.3867 52 2 4 4273 1 21 26
L-Y 0.0 -17.1558 -59.1218 -76.2776 38 2 1 2862 1 16 11
M-N 0.0 0.0 -0.777 -0.777 9 0 0 111 0 0 0
M-O 0.0 -12.8865 -108.993 -121.8795 54 2 4 4875 1 21 26
M-P 0.0 -6.9965 -106.687 -113.6835 54 4 4 4610 1 21 27
N-Q -12.9886 -11.3121 -102.002 -126.3028 51 2 4 4543 1 22 26
O-P -11.8247 -8.8886 -93.9788 -114.6921 51 6 4 4202 1 22 27
P-R 0.0 0.0 -3.9758 -3.9758 9 0 0 219 0 0 0
P-Z -3.5465 -26.2394 -65.9936 -95.7795 37 1 1 3070 2 16 11
R-Z -2.2245 -24.0183 -76.117 -102.3598 37 1 1 3287 2 16 11
S-W -6.7398 -14.9656 -94.3913 -116.0968 50 2 4 4395 1 21 26
S-X 0.0 -15.0568 -99.2239 -114.2807 52 2 4 4392 1 21 24
T-U 0.0 -10.1266 -104.653 -114.7796 53 3 4 4488 1 21 24
U-W 0.0 0.0 -2.1145 -2.1145 10 0 0 131 0 0 0
U-Y 0.0 0.0 -0.0136 -0.0136 3 0 0 5 0 6 3
W-X -6.0723 -8.1638 -113.874 -128.11 53 1 4 4895 1 22 24