2JA8
cpd lesion containing rna polymerase ii elongation complex d
Total interactions analyzed 105
Total true interactions 30
Strongest Interaction Chains A-B
Int. Res. 767
Norm. En. per Res. -4.1642
Hub Node B(10)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -355.6322 -298.9425 -2539.37 -3193.9447 767 250 63 109846 24 259 237
A-C -8.354 1.4272 -64.2805 -71.2072 49 8 0 2962 0 16 19
A-D 0.0 -10.1927 -20.9177 -31.1104 31 1 1 1410 0 11 4
A-E -75.0842 -85.1125 -533.549 -693.7457 208 42 14 23384 7 79 65
A-F -67.1883 -49.9089 -473.658 -590.7552 175 39 15 21295 2 64 55
A-G -19.6128 -68.7989 -117.427 -205.8388 66 13 5 5648 3 22 15
A-H -66.9805 -24.8478 -344.866 -436.6943 138 55 14 17215 3 35 34
A-I -87.9741 -34.616 -420.483 -543.0731 138 50 11 17452 5 54 49
A-K -30.6698 -34.9884 -244.884 -310.5422 89 27 8 9987 3 23 20
B-C -81.5247 -105.0332 -443.994 -630.5519 167 44 4 17868 8 57 60
B-D -11.3097 -17.7551 -48.9317 -77.9964 34 4 1 2499 2 16 18
B-E 0.0 0.0 -4.4942 -4.4942 9 3 0 351 0 2 1
B-F -13.7408 -14.6814 -16.0996 -44.5217 27 2 0 649 1 7 8
B-G -7.4802 -3.1921 -10.0168 -20.6891 26 1 0 839 0 6 4
B-H 0.0 0.0 -0.6987 -0.6987 2 0 0 50 0 0 0
B-I -11.1049 -59.6591 -262.328 -333.092 130 23 2 13263 2 51 49
B-J -33.4938 -29.835 -379.254 -442.5827 139 35 7 18208 3 35 36
B-K -9.6936 -12.5716 -76.1605 -98.4257 58 13 0 3427 2 16 18
B-L -42.2668 -62.8065 -209.563 -314.6363 108 14 9 10476 8 44 43
C-H 0.0 -2.9015 -28.2268 -31.1283 24 0 1 1434 0 8 7
C-J -58.6158 -45.4105 -221.888 -325.9143 105 42 11 12591 6 38 26
C-K -26.0939 -27.8449 -403.877 -457.8158 154 40 16 21841 6 46 45
C-L -35.3257 -75.4135 -138.331 -249.0702 61 14 8 5868 8 23 16
D-F 0.0 0.0 -0.7284 -0.7284 6 0 0 133 0 1 2
D-G -42.845 6.9818 -504.645 -540.5082 195 52 21 24169 7 60 52
E-F -9.7 -24.9515 -26.3208 -60.9723 23 6 0 1253 1 7 4
F-G -7.232 -12.3272 -106.355 -125.9141 56 8 1 4911 1 11 12
H-K 0.0 0.0 -20.5502 -20.5502 24 1 0 1463 0 4 5
J-L 0.0 0.0 -11.4418 -11.4418 9 0 0 537 0 1 1
K-L 0.0 8.1623 -1.509 6.6533 5 0 0 203 0 3 2