2JA6
cpd lesion containing rna polymerase ii elongation complex b
Total interactions analyzed 105
Total true interactions 30
Strongest Interaction Chains C-L
Int. Res. 61
Norm. En. per Res. -4.1584
Hub Node B(10)
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Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -359.4038 -295.1882 -2467.66 -3122.252 770 257 62 109416 24 258 237
A-C -12.512 1.4233 -67.3428 -78.4314 49 7 0 2982 0 15 19
A-D 0.0 -15.2969 -23.7431 -39.04 31 2 1 1479 0 11 4
A-E -81.0699 -78.8344 -533.573 -693.4773 209 48 14 23810 6 80 62
A-F -86.4069 -55.6192 -489.401 -631.4271 176 33 15 21326 2 66 54
A-G -11.3916 -66.6367 -112.918 -190.9463 67 14 5 5656 3 23 15
A-H -67.6104 -28.2498 -347.055 -442.9152 138 55 13 17110 3 35 35
A-I -98.9589 -25.6047 -422.805 -547.3686 137 44 11 17212 5 52 49
A-K -28.9465 -35.4026 -247.474 -311.8232 92 25 8 9881 3 23 18
B-C -76.6723 -115.9346 -423.765 -616.3719 167 51 4 17694 8 54 61
B-D -3.9977 -16.3839 -45.5791 -65.9606 34 2 1 2475 2 16 18
B-E 0.0 0.0 -3.2114 -3.2114 9 3 0 341 0 2 1
B-F -11.3997 -13.311 -16.7617 -41.4724 27 2 0 666 1 7 8
B-G -8.5407 -3.4166 -9.15 -21.1074 27 0 0 819 0 6 4
B-H 0.0 0.0 -0.6774 -0.6774 2 0 0 50 0 0 0
B-I -9.1722 -63.8116 -268.796 -341.7798 129 26 3 13264 2 50 49
B-J -35.5161 -28.6878 -372.528 -436.7319 140 35 6 18105 4 35 37
B-K -9.7134 -14.7189 -65.0684 -89.5007 57 14 0 3321 2 16 18
B-L -49.0408 -62.707 -204.296 -316.0439 108 17 8 10614 7 45 45
C-H 0.0 -7.4127 -30.0203 -37.433 24 0 1 1470 0 8 7
C-J -54.3789 -14.8821 -213.912 -283.173 107 44 11 12550 6 38 26
C-K -30.9816 -23.317 -411.252 -465.5507 154 44 17 21466 4 47 45
C-L -42.4977 -81.8745 -129.288 -253.6602 61 13 8 5844 5 24 15
D-F 0.0 0.0 -0.5837 -0.5837 6 0 0 118 0 1 2
D-G -43.4259 6.4422 -507.254 -544.2377 199 54 22 24394 7 58 51
E-F -9.0941 -26.022 -24.215 -59.3312 22 5 0 1286 1 7 5
F-G -5.7204 -13.2711 -113.303 -132.2945 57 10 1 5006 1 11 11
H-K 0.0 0.0 -21.0236 -21.0236 22 1 0 1479 0 4 5
J-L 0.0 0.0 -11.3124 -11.3124 10 0 0 551 0 1 1
K-L 0.0 8.1403 -1.5444 6.5959 5 0 0 219 0 3 2